> Transcribed locus, strongly similar to NP_001036.1 SLC6A4 gene product [Homo sapiens]
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UGID:150178     UniGene Hs.134662     Homo sapiens (human)   Links
Transcribed locus, strongly similar to NP_001036.1 SLC6A4 gene product [Homo sapiens]

Human putative protein-coding gene. Represented by 15 ESTs from 4 cDNA libraries. EST representation biased toward head and neck tumor. [UniGene 150178 - Hs.134662]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001036.1 SLC6A4 gene product H. sapiens 100.0 124
NP_034614.2 Slc6a4 gene product M. musculus 84.7 124
Other hits (2 of 13) [Show all]SpeciesId(%)Len(aa)
NP_001027995.1 SLC6A4 gene product M. mulatta 98.4 124
XP_001135066.2 PREDICTED: sodium-dependent serotonin transporter isoform 1 P. troglodytes 98.2 166

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: head and neck tumor [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: lung; mouth; placenta; brain
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

EST sequences (15)

DR004996.1 Clone TC119478 placenta 5' read
DC358175.1 Clone HLUNG2000008 lung 5' read P
DC358335.1 Clone HLUNG2002590 lung 5' read P
DC358339.1 Clone HLUNG2002664 lung 5' read P
DC347459.1 Clone CTONG2028649 mouth 5' read P
DC358365.1 Clone HLUNG2003052 lung 5' read P
DC358453.1 Clone HLUNG2004407 lung 5' read P
DC358687.1 Clone HLUNG2008082 lung 5' read P
DC341297.1 Clone BRTHA2027388 brain 5' read P
DC358753.1 Clone HLUNG2009057 lung 5' read P
DC358821.1 Clone HLUNG2009841 lung 5' read P
DC358953.1 Clone HLUNG2011844 lung 5' read P
DC359254.1 Clone HLUNG2016147 lung 5' read P
DC345903.1 Clone CTONG2007596 mouth 5' read
DC359334.1 Clone HLUNG2017449 lung 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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