> Cytochrome c oxidase subunit Vb (COX5B)
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UGID:130981     UniGene Hs.1342     Homo sapiens (human)   COX5B Order cDNA clone, Links
Cytochrome c oxidase subunit Vb (COX5B)

Human protein-coding gene COX5B. Represented by 438 ESTs from 171 cDNA libraries. Corresponds to reference sequence NM_001862.2. [UniGene 130981 - Hs.1342]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001853.2 COX5B gene product H. sapiens 100.0 128
NP_034072.2 cytochrome c oxidase subunit 5B, mitochondrial M. musculus 86.8 128
XP_001342184.1 PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like D. rerio 74.0 126
NP_001085056.1 cytochrome c oxidase subunit Vb, gene 2 X. laevis 66.4 118
Other hits (2 of 17) [Show all]SpeciesId(%)Len(aa)
XP_001154903.2 PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like isoform 1 P. troglodytes 97.4 151
XP_001099921.1 PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like isoform 2 M. mulatta 90.7 128

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: liver; intestine; brain; muscle; mixed; thyroid; pancreas; eye; kidney; tonsil; prostate; lung; placenta; ear; heart; skin; adrenal gland; cervix; ovary; uncharacterized tissue; uterus; embryonic tissue; testis; mammary gland; blood; bone marrow; stomach; salivary gland; umbilical cord; bone; lymph node; ascites; connective tissue; adipose tissue; vascular; epididymis; pituitary gland; spleen
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2q11.2
UniSTS entry: Chr 2 RH66826
UniSTS entry: Chr 2 RH11516
UniSTS entry: Chr 2 GDB:384878
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

BT006742.1 Homo sapiens cytochrome c oxidase subunit Vb mRNA, complete cds P
NM_001862.2 Homo sapiens cytochrome c oxidase subunit Vb (COX5B), nuclear gene encoding mitochondrial protein, mRNA PA
M19961.1 Human cytochrome c oxidase subunit Vb (coxVb) mRNA, complete cds PA
CR541753.1 Homo sapiens full open reading frame cDNA clone RZPDo834G1029D for gene COX5B, cytochrome c oxidase subunit Vb; complete cds, without stopcodon P
CR541727.1 Homo sapiens full open reading frame cDNA clone RZPDo834C1029D for gene COX5B, cytochrome c oxidase subunit Vb; complete cds, incl. stopcodon P
BC006229.2 Homo sapiens cytochrome c oxidase subunit Vb, mRNA (cDNA clone MGC:10622 IMAGE:3952882), complete cds PA

EST sequences (10 of 438) [Show all sequences]

AA902930.1 Clone IMAGE:1516737 uncharacterized tissue 3' read
AI015584.1 Clone IMAGE:1636854 kidney 3' read
AI082704.1 Clone IMAGE:1660648 mixed 3' read
AI090063.1 Clone IMAGE:1697030 uterus 3' read P
AI160480.1 Clone IMAGE:1705341 heart 3' read PA
BX109014.1 Clone IMAGp998O08535_;_IMAGE:247903 mixed PA
AI167270.1 Clone IMAGE:1661160 mixed 3' read PA
AI202635.1 Clone IMAGE:1943625 prostate 3' read P
AI266617.1 Clone IMAGE:1899669 kidney 3' read
CB106869.1 Clone L3SNU475-11-H07 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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