> Actin related protein 2/3 complex, subunit 5-like (ARPC5L)
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UGID:149621     UniGene Hs.132499     Homo sapiens (human)   ARPC5L Order cDNA clone, Links
Actin related protein 2/3 complex, subunit 5-like (ARPC5L)

Human protein-coding gene ARPC5L. Represented by 365 ESTs from 186 cDNA libraries. Corresponds to reference sequence NM_030978.1. [UniGene 149621 - Hs.132499]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003918861.1 PREDICTED: actin-related protein 2/3 complex subunit 5-like protein P. anubis 100.0 152
XP_001151241.1 PREDICTED: actin-related protein 2/3 complex subunit 5-like protein-like P. troglodytes 100.0 152
NP_112240.1 ARPC5L gene product H. sapiens 100.0 152
XP_001502092.1 PREDICTED: actin-related protein 2/3 complex subunit 5-like protein-like E. caballus 100.0 152
NP_001172063.1 LOC100154462 gene product S. scrofa 100.0 152
XP_001082363.1 PREDICTED: actin-related protein 2/3 complex subunit 5-like protein-like M. mulatta 100.0 100
NP_083085.1 actin-related protein 2/3 complex subunit 5-like protein M. musculus 98.0 152
NP_956872.1 arpc5la gene product D. rerio 80.7 149
NP_001086165.1 MGC84053 protein X. laevis 79.6 151
NP_608693.1 Actin-related protein 2/3 complex, subunit 5, isoform A D. melanogaster 50.0 146
Other hits (2 of 22) [Show all]SpeciesId(%)Len(aa)
NP_001029909.1 ARPC5L gene product B. taurus 99.3 152
XP_002720498.1 PREDICTED: actin related protein 2/3 complex, subunit 5-like O. cuniculus 99.3 152

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: lung; brain; uncharacterized tissue; eye; kidney; testis; ovary; liver; lymph; stomach; spleen; muscle; cervix; skin; pancreas; pituitary gland; uterus; mixed; embryonic tissue; lymph node; placenta; prostate; bone marrow; thymus; intestine; adipose tissue; mammary gland; pharynx; blood; larynx; tonsil; heart; parathyroid; thyroid; ascites; esophagus; salivary gland; bone; vascular; adrenal gland; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9q33.3
UniSTS entry: Chr 17 G19389
UniSTS entry: Chr 17 SGC32156 [Map Viewer]
UniSTS entry: Chr 9 RH41807
UniSTS entry: Chr 9 WI-20843 [Map Viewer]
UniSTS entry: Chr 9 RH1557
UniSTS entry: Chr 1 D11S2921
UniSTS entry: Chr 1 SHGC-67307
UniSTS entry: Chr 1 sY3084
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

BX537659.1 Homo sapiens mRNA; cDNA DKFZp686O1694 (from clone DKFZp686O1694) PA
AF087842.1 Homo sapiens ARC16-2 mRNA, complete cds PA
AK023881.1 Homo sapiens cDNA FLJ13819 fis, clone THYRO1000452
BC002418.1 Homo sapiens actin related protein 2/3 complex, subunit 5-like, mRNA (cDNA clone MGC:3038 IMAGE:3163950), complete cds PA
BC000798.1 Homo sapiens actin related protein 2/3 complex, subunit 5-like, mRNA (cDNA clone MGC:5476 IMAGE:3451934), complete cds PA
BC000018.1 Homo sapiens actin related protein 2/3 complex, subunit 5-like, mRNA (cDNA clone MGC:3311 IMAGE:3509794), complete cds PA
NM_030978.1 Homo sapiens actin related protein 2/3 complex, subunit 5-like (ARPC5L), mRNA PA
AK056174.1 Homo sapiens cDNA FLJ31612 fis, clone NT2RI2002926, highly similar to Homo sapiens actin related protein 2/3 complex, subunit 5-like (ARPC5L), mRNA P
AK308570.1 Homo sapiens cDNA, FLJ98611
AK315604.1 Homo sapiens cDNA, FLJ96684 P
BC031388.1 Homo sapiens actin related protein 2/3 complex, subunit 5-like, mRNA (cDNA clone IMAGE:5194006), with apparent retained intron PA

EST sequences (10 of 365) [Show all sequences]

AA974422.1 Clone IMAGE:1587464 uncharacterized tissue 3' read A
AA995164.1 Clone IMAGE:1631634 mammary gland 3' read A
R18127.1 Clone IMAGE:125034 mixed 5' read
R18128.1 Clone IMAGE:125034 mixed 3' read A
AA909939.1 Clone IMAGE:1542768 mixed 3' read A
AI023941.1 Clone IMAGE:1650587 parathyroid 3' read A
AA928379.1 Clone IMAGE:1553133 uncharacterized tissue 3' read
AI051531.1 Clone IMAGE:1659105 embryonic tissue 3' read A
AI074887.1 Clone IMAGE:1667067 skin 3' read A
AI079395.1 Clone IMAGE:1680095 skin 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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