> Two pore segment channel 2 (TPCN2)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:149372     UniGene Hs.131851     Homo sapiens (human)   TPCN2 Order cDNA clone, Links
Two pore segment channel 2 (TPCN2)

Human protein-coding gene TPCN2. Represented by 145 ESTs from 103 cDNA libraries. Corresponds to reference sequence NM_139075.3. [UniGene 149372 - Hs.131851]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_620714.2 TPCN2 gene product H. sapiens 100.0 751
NP_666318.2 Tpcn2 gene product M. musculus 76.5 728
NP_001089672.1 two pore segment channel 2 X. laevis 71.5 322
NP_001071190.1 tpcn2 gene product D. rerio 60.7 771
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_001173935.2 PREDICTED: two pore calcium channel protein 2 P. troglodytes 97.8 964
XP_003909477.1 PREDICTED: two pore calcium channel protein 2 P. anubis 97.3 751

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; brain; eye; intestine; mixed; stomach; pancreas; embryonic tissue; lung; mammary gland; larynx; kidney; lymph node; uterus; spleen; placenta; tonsil; thymus; trachea; testis; ovary; vascular; pharynx; bladder; skin; blood; prostate; connective tissue; bone; thyroid; mouth
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11q13.3
UniSTS entry: Chr 11 SGC31049 [Map Viewer]
UniSTS entry: Chr 11 G65699
UniSTS entry: Chr 1 D8S2278
UniSTS entry: Chr 1 PMC156606P4
UniSTS entry: Chr 1 G35510
UniSTS entry: Chr 1 PMC156606P3
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AK124882.1 Homo sapiens cDNA FLJ42892 fis, clone BRHIP3008565
BC063008.1 Homo sapiens two pore segment channel 2, mRNA (cDNA clone MGC:70581 IMAGE:5214862), complete cds PA
BC064339.1 Homo sapiens cDNA clone IMAGE:4369783, partial cds A
AL137479.1 Homo sapiens mRNA; cDNA DKFZp434M0223 (from clone DKFZp434M0223); partial cds PA
AK023366.1 Homo sapiens cDNA FLJ13304 fis, clone OVARC1001391, highly similar to Homo sapiens two pore segment channel 2 (TPCN2), mRNA P
AY029200.1 Homo sapiens two-pore calcium channel protein 2 mRNA, complete cds P
NM_139075.3 Homo sapiens two pore segment channel 2 (TPCN2), mRNA PA
AK298919.1 Homo sapiens cDNA FLJ58483 complete cds, highly similar to Homo sapiens two pore segment channel 2 (TPCN2), mRNA P

EST sequences (10 of 145) [Show all sequences]

AA923516.1 Clone IMAGE:1536168 kidney 3' read
AA907702.1 Clone IMAGE:1542636 mixed 3' read
AI093483.1 Clone IMAGE:1696301 uterus 3' read A
BX106741.1 Clone IMAGp998B175773_;_IMAGE:2327344 intestine
AI203135.1 Clone IMAGE:1942752 uncharacterized tissue 3' read A
AI591094.1 Clone IMAGE:2267029 mouth 3' read
AI632290.1 Clone IMAGE:2241503 uncharacterized tissue 3' read
AI632451.1 Clone IMAGE:2305152 uncharacterized tissue 3' read A
AI636300.1 Clone IMAGE:2294238 pancreas 3' read A
AI695882.1 Clone IMAGE:2238227 uncharacterized tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help