Chromosome 10 open reading frame 53 (C10orf53)

Restricted Expression:

testis [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO Profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

testis; mixed; uncharacterized tissue; lung; brain; pancreas

NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:149152 UniGene Hs.131287 Homo sapiens (human) C10orf53

Links

Chromosome 10 open reading frame 53 (C10orf53)

Human protein-coding gene C10orf53. Represented by 25 ESTs from 9 cDNA libraries. EST representation biased toward testis. Corresponds to 2 reference sequences (different isoforms). [UniGene 149152 - Hs.131287]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_872360.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	C10orf53 gene product	H. sapiens	100.0	156
NP_001029209.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	1700024G13Rik gene product	M. musculus	77.4	92
Other hits (2 of 10) [Show all]		Species	Id(%)	Len(aa)
XP_001139403.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: UPF0728 protein C10orf53 homolog isoform 2	P. troglodytes	97.5	156
XP_001107169.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: UPF0728 protein C10orf53-like	M. mulatta	96.8	92

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	10
	Map position:	10q11.23

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

NM_182554.2	Homo sapiens chromosome 10 open reading frame 53 (C10orf53), transcript variant 1, mRNA	P
NM_001042427.1	Homo sapiens chromosome 10 open reading frame 53 (C10orf53), transcript variant 2, mRNA	P
AK091773.1	Homo sapiens cDNA FLJ34454 fis, clone HLUNG2002562	P

EST sequences (10 of 25) [Show all sequences]

AA969884.1	Clone IMAGE:1581112	mixed	3' read
AI018419.1	Clone IMAGE:1641903	testis	3' read	A
BX102324.1	Clone IMAGp998B164166_;_IMAGE:1641903	testis
AI216456.1	Clone IMAGE:1844028	mixed	3' read	A
AA723888.1	Clone IMAGE:1326002	mixed	3' read	A
AI917746.1	Clone IMAGE:2305762	uncharacterized tissue	3' read	A
AI990484.1	Clone IMAGE:2499648	uncharacterized tissue	3' read	PA
AW182169.1	Clone IMAGE:2662671	mixed	3' read
AW665925.1	Clone IMAGE:2980096	mixed	3' read	PA
CV030399.1		mixed	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria