> Synaptotagmin VII (SYT7)
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UGID:149100     UniGene Hs.131188     Homo sapiens (human)   SYT7 Order cDNA clone, Links
Synaptotagmin VII (SYT7)

Human protein-coding gene SYT7. Represented by 213 ESTs from 94 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 149100 - Hs.131188]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001238994.1 SYT7 gene product H. sapiens 100.0 477
XP_003909775.1 PREDICTED: synaptotagmin-7 isoform 2 P. anubis 99.8 477
XP_613426.5 PREDICTED: synaptotagmin-7 isoform 2 B. taurus 99.6 478
XP_001494111.2 PREDICTED: synaptotagmin-7 E. caballus 99.5 402
NP_061271.1 Syt7 gene product M. musculus 98.8 402
XP_002662797.2 PREDICTED: synaptotagmin-7 D. rerio 78.6 476
NP_995593.2 Syt7, isoform F D. melanogaster 60.2 269
NP_001022129.1 Protein SNT-1, isoform a C. elegans 47.5 305
Other hits (2 of 35) [Show all]SpeciesId(%)Len(aa)
XP_540917.4 PREDICTED: synaptotagmin-7 isoform 2 C. lupus familiaris 99.4 478
NP_067691.1 Syt7 gene product R. norvegicus 99.3 402

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; placenta; prostate; lung; pancreas; intestine; uncharacterized tissue; eye; embryonic tissue; mixed; liver; mouth; kidney; stomach; blood; larynx; ascites; connective tissue; bone; uterus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11q12-q13.1
UniSTS entry: Chr 11 STS-R71085
UniSTS entry: RH47105
UniSTS entry: Chr 11 D11S2270E
UniSTS entry: Chr 11 A007K14 [Map Viewer]
UniSTS entry: Chr 11 D11S4425 [Map Viewer]
UniSTS entry: RH102258
UniSTS entry: Syt7
UniSTS entry: Chr 11 SYT7_8889
UniSTS entry: Chr 11 D11S4072 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

BC042495.1 Homo sapiens synaptotagmin VII, mRNA (cDNA clone IMAGE:5197755), with apparent retained intron PA
NM_004200.3 Homo sapiens synaptotagmin VII (SYT7), transcript variant 2, mRNA PA
AL137559.1 Homo sapiens mRNA; cDNA DKFZp434M2120 (from clone DKFZp434M2120) A
BC125170.1 Homo sapiens synaptotagmin VII, mRNA (cDNA clone MGC:150517 IMAGE:40121712), complete cds P
BC125171.1 Homo sapiens cDNA clone IMAGE:40121714, containing frame-shift errors P
AK294636.1 Homo sapiens cDNA FLJ53554 complete cds
Y19240.1 Homo sapiens partial mRNA for synaptotagmin 7 (SYT7 gene), exons 2, 3, 3a and 4 P
Y19238.1 Homo sapiens partial mRNA for synaptotagmin 7 (SYT7 gene), exons 2 to 4
NM_001252065.1 Homo sapiens synaptotagmin VII (SYT7), transcript variant 1, mRNA PA
AF038535.1 Homo sapiens synaptotagmin VII mRNA, partial cds P

EST sequences (10 of 213) [Show all sequences]

AA962411.1 Clone IMAGE:1570001 lung 3' read A
AA885659.1 Clone IMAGE:1500027 lung 3' read
AA885825.1 Clone IMAGE:1500317 lung 3' read
AA885838.1 Clone IMAGE:1500378 lung 3' read A
AA886764.1 Clone IMAGE:1500253 lung 3' read
AI033033.1 Clone IMAGE:1654367 mixed 3' read
BX118826.1 Clone IMAGp998A21329_;_IMAGE:178844 brain P
BX094140.1 Clone IMAGp998J02547_;_IMAGE:252385 placenta
AI214933.1 Clone IMAGE:1883426 lung 3' read A
CB163601.1 Clone L17N670205n1-25-C09 liver 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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