> Outer dense fiber of sperm tails 2 (ODF2)
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UGID:148321     UniGene Hs.129055     Homo sapiens (human)   ODF2 Order cDNA clone, Links
Outer dense fiber of sperm tails 2 (ODF2)

Human protein-coding gene ODF2. Represented by 583 ESTs from 201 cDNA libraries. Corresponds to 11 reference sequences (different isoforms). [UniGene 148321 - Hs.129055]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_702913.1 ODF2 gene product H. sapiens 100.0 892
XP_001111509.2 PREDICTED: outer dense fiber protein 2-like isoform 14 M. mulatta 99.9 911
XP_001158532.2 PREDICTED: outer dense fiber protein 2 isoform 15 P. troglodytes 99.9 892
XP_003911290.1 PREDICTED: outer dense fiber protein 2 P. anubis 99.8 884
NP_001106684.1 Odf2 gene product M. musculus 98.5 824
NP_001088742.1 outer dense fiber protein 2 X. laevis 58.1 645
XP_001332564.4 PREDICTED: outer dense fiber protein 2 D. rerio 57.7 829
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_548436.3 PREDICTED: outer dense fiber protein 2 isoform 1 C. lupus familiaris 99.2 892
XP_003364200.1 PREDICTED: outer dense fiber protein 2 isoform 5 E. caballus 98.9 828

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; uncharacterized tissue; mixed; mammary gland; intestine; stomach; uterus; embryonic tissue; lung; pharynx; skin; umbilical cord; adrenal gland; mouth; amniotic fluid; placenta; prostate; heart; trachea; thymus; eye; connective tissue; nerve; kidney; bone marrow; lymph node; spleen; thyroid; blood; bladder; cervix; tonsil; pancreas; larynx; ascites; liver; bone; ovary; muscle; lymph; esophagus; epididymis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9q34.11
UniSTS entry: Chr 9 STS-AA034010
UniSTS entry: Odf2
UniSTS entry: Odf2
UniSTS entry: Chr 1 D11S2921
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (29)

AY319414.1 Homo sapiens outer dense fiber of sperm tails 2 isoform 3 (ODF2) mRNA, complete cds PA
AY366499.1 Homo sapiens outer dense fiber of sperm tails 2 (ODF2) mRNA, complete cds; alternatively spliced PA
NM_002540.4 Homo sapiens outer dense fiber of sperm tails 2 (ODF2), transcript variant 9, mRNA P
BC091500.1 Homo sapiens outer dense fiber of sperm tails 2, mRNA (cDNA clone MGC:111096 IMAGE:30378678), complete cds PA
DQ444714.1 Homo sapiens cenexin 1 mRNA, complete cds P
DQ444713.1 Homo sapiens cenexin 1 variant 1 mRNA, complete cds, alternatively spliced P
BC010629.1 Homo sapiens outer dense fiber of sperm tails 2, mRNA (cDNA clone MGC:9034 IMAGE:3874501), complete cds PA
AK308278.1 Homo sapiens cDNA, FLJ98226 P
AK309917.1 Homo sapiens cDNA, FLJ99958 P
AK093367.1 Homo sapiens cDNA FLJ36048 fis, clone TESTI2017954, highly similar to Homo sapiens outer dense fiber of sperm tails 2 (ODF2), transcript variant 2, mRNA P
AK301855.1 Homo sapiens cDNA FLJ56030 complete cds, highly similar to Homo sapiens outer dense fiber of sperm tails 2 (ODF2), transcript variant 2, mRNA PA
AK301842.1 Homo sapiens cDNA FLJ56168 complete cds, highly similar to Homo sapiens outer dense fiber of sperm tails 2 (ODF2), transcript variant 2, mRNA PA
AK301754.1 Homo sapiens cDNA FLJ56166 complete cds, highly similar to Homo sapiens outer dense fiber of sperm tails 2 (ODF2), transcript variant 2, mRNA P
AK300793.1 Homo sapiens cDNA FLJ59435 complete cds, highly similar to Homo sapiens outer dense fiber of sperm tails 2 (ODF2), transcript variant 2, mRNA PA
AK299303.1 Homo sapiens cDNA FLJ55042 complete cds, highly similar to Homo sapiens outer dense fiber of sperm tails 2 (ODF2), transcript variant 1, mRNA P
AK302684.1 Homo sapiens cDNA FLJ55346 complete cds, highly similar to Homo sapiens outer dense fiber of sperm tails 2 (ODF2), transcript variant 1, mRNA P
BC012785.2 Homo sapiens outer dense fiber of sperm tails 2, mRNA (cDNA clone IMAGE:3951577), partial cds PA
NM_153440.1 Homo sapiens outer dense fiber of sperm tails 2 (ODF2), transcript variant 7, mRNA P
NM_153433.1 Homo sapiens outer dense fiber of sperm tails 2 (ODF2), transcript variant 2, mRNA P
NM_153432.1 Homo sapiens outer dense fiber of sperm tails 2 (ODF2), transcript variant 3, mRNA P
NM_153439.1 Homo sapiens outer dense fiber of sperm tails 2 (ODF2), transcript variant 5, mRNA P
NM_153436.1 Homo sapiens outer dense fiber of sperm tails 2 (ODF2), transcript variant 4, mRNA P
NM_153435.1 Homo sapiens outer dense fiber of sperm tails 2 (ODF2), transcript variant 1, mRNA P
NM_001242354.1 Homo sapiens outer dense fiber of sperm tails 2 (ODF2), transcript variant 8, mRNA PA
NM_001242353.1 Homo sapiens outer dense fiber of sperm tails 2 (ODF2), transcript variant 10, mRNA P
NM_001242352.1 Homo sapiens outer dense fiber of sperm tails 2 (ODF2), transcript variant 11, mRNA P
NM_153437.2 Homo sapiens outer dense fiber of sperm tails 2 (ODF2), transcript variant 6, mRNA PA
AF012549.1 Homo sapiens outer dense fiber protein 2 (odf2) mRNA, complete cds PA
AF053970.1 Homo sapiens outer dense fiber protein 2/2 mRNA, complete cds P

EST sequences (10 of 583) [Show all sequences]

AA983820.1 Clone IMAGE:1581397 mixed 3' read
AA983840.1 Clone IMAGE:1581434 mixed 3' read PA
AI017984.1 Clone IMAGE:1628342 mixed 3' read PA
AA948573.1 Clone IMAGE:1560466 mixed 3' read
AI039518.1 Clone IMAGE:1658488 embryonic tissue 3' read
AI066749.1 Clone IMAGE:1638375 testis 3' read PA
AI075901.1 Clone IMAGE:1640383 testis 3' read A
AI126614.1 Clone IMAGE:1736040 testis 3' read PA
BX106323.1 Clone IMAGp998B171010_;_IMAGE:430000 mixed A
CB156479.1 Clone B2N807043-19-B02 brain 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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