Cholecystokinin A receptor (CCKAR)

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Finding cDNAs

UGID:130684 UniGene Hs.129 Homo sapiens (human) CCKAR

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Cholecystokinin A receptor (CCKAR)

Human protein-coding gene CCKAR. Represented by 5 ESTs from 4 cDNA libraries. Corresponds to reference sequence NM_000730.2. [UniGene 130684 - Hs.129]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_000721.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	CCKAR gene product	H. sapiens	100.0	427
XP_526545.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: cholecystokinin receptor type A	P. troglodytes	99.8	427
NP_033957.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Cckar gene product	M. musculus	92.6	435
NP_001108186.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	uncharacterized protein LOC100137117	D. rerio	57.9	423
NP_001079277.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	cholecystokinin receptor	X. laevis	57.7	397
Other hits (2 of 28) [Show all]		Species	Id(%)	Len(aa)
XP_003898608.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: cholecystokinin receptor type A	P. anubis	99.1	427
XP_001084186.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: cholecystokinin receptor type A	M. mulatta	98.4	427

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	mixed; brain; uncharacterized tissue

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	4
Map position:	4p15.1-p15.2
UniSTS entry:		CCKAR
UniSTS entry:	Chr 4	STS-L19315
UniSTS entry:	Chr 4	D4S3157	[Map Viewer]
UniSTS entry:	Chr 4	SHGC-50173

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

L19315.1	Human cholecystokinin A receptor mRNA, complete cds	P
AY322549.1	Homo sapiens cholecystokinin A receptor mRNA, complete cds	P
NM_000730.2	Homo sapiens cholecystokinin A receptor (CCKAR), mRNA	P
BC074987.2	Homo sapiens cholecystokinin A receptor, mRNA (cDNA clone MGC:104068 IMAGE:30915519), complete cds	P
AK313978.1	Homo sapiens cDNA, FLJ94628, Homo sapiens cholecystokinin A receptor (CCKAR), mRNA	P
L13605.1	Human cholecystokinin A receptor mRNA, complete cds	P

EST sequences (5)

CO917667.1	Clone IMAGE:7262008	mixed	3' read
CO917713.1	Clone IMAGE:7262008	mixed	5' read
CO959611.1	Clone IMAGE:7389729	uncharacterized tissue	5' read	P
DA182155.1	Clone BRAMY2047317	brain	5' read	P
DA409472.1	Clone BRTHA3015836	brain	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria