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UGID:130964     UniGene Hs.1288     Homo sapiens (human)   ACTA1
Actin, alpha 1, skeletal muscle (ACTA1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_033736.1 actin, alpha 1, skeletal muscle M. musculus 100.0 376
NP_062085.1 actin, alpha 1, skeletal muscle R. norvegicus 100.0 376
NP_001079664.1 similar to actin alpha X. laevis 100.0 376
NP_001006709.1 actin, alpha 1, skeletal muscle X. tropicalis 100.0 376
NP_001026234.1 actin, alpha 1, skeletal muscle G. gallus 100.0 376
NP_001091.1 actin, alpha 1, skeletal muscle H. sapiens 100.0 376
XP_001497763.1 PREDICTED: actin, alpha 1, skeletal muscle isoform 1 E. caballus 100.0 376
XP_001928128.1 PREDICTED: actin, alpha 1, skeletal muscle S. scrofa 100.0 376
NP_776650.1 actin, alpha 1, skeletal muscle B. taurus 100.0 376
XP_001370562.1 PREDICTED: similar to alpha-cardiac actin M. domestica 99.7 376
NP_001142321.1 hypothetical protein LOC100274491 Z. mays 99.7 376
XP_002200536.1 PREDICTED: actin, alpha, cardiac muscle 1 T. guttata 99.7 376
NP_001002066.1 cardiac muscle alpha actin 1 D. rerio 99.7 376
NP_001117011.1 fast myotomal muscle actin S. salar 99.7 376
XP_001088312.1 PREDICTED: similar to Actin, alpha cardiac (Alpha-cardiac actin) isoform 2 M. mulatta 99.7 376
XP_001135141.1 PREDICTED: similar to alpha-cardiac actin isoform 2 P. troglodytes 99.7 376
XP_535424.1 PREDICTED: similar to Actin, alpha cardiac (Alpha-cardiac actin) isoform 3 C. lupus familiaris 99.7 376
NP_001095152.1 alpha-smooth muscle actin O. cuniculus 99.7 376
NP_508841.1 ACTin family member (act-4) C. elegans 96.8 375
NP_511052.1 actin 5C, isoform B D. melanogaster 96.8 375
XP_001699068.1 actin C. reinhardtii 94.2 376
NP_187818.1 ACT11 (actin-11); structural constituent of cytoskeleton A. thaliana 92.0 376
NP_116614.1 Actin, structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions; Act1p S. cerevisiae 91.2 373
XP_961133.2 actin N. crassa 90.9 373

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: muscle; heart; larynx; thyroid; pancreas; mammary gland; tonsil; brain; eye; bone; bone marrow; placenta; bladder; adipose tissue; nerve; umbilical cord; peritoneum; uncharacterized tissue; prostate; lung; embryonic tissue; kidney; vascular; adrenal gland; ovary; mouth; pharynx; epididymis; liver; mixed; uterus; intestine; testis; pituitary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q42.13
UniSTS entry: Chr 1 RH36158
UniSTS entry: Chr 3 (n/a)
UniSTS entry: Chr 14 (n/a)
UniSTS entry: Chr 5 (n/a)
UniSTS entry: Chr 5 PMC23952P1
UniSTS entry: Chr 6 (n/a)
UniSTS entry: Chr 7 (n/a)
UniSTS entry: Chr 18 G49387
UniSTS entry: Chr 5 G15871
UniSTS entry: Chr 3 PMC110143P1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AY280960.1 Homo sapiens actin alpha 1 skeletal muscle protein (ACTA1) mRNA, complete cds; alternatively spliced P
BX648545.1 Homo sapiens mRNA; cDNA DKFZp779F0855 (from clone DKFZp779F0855) PA
NM_001100.3 Homo sapiens actin, alpha 1, skeletal muscle (ACTA1), mRNA PA
J00068.1 Human adult skeletal muscle alpha-actin mRNA P
CR536516.1 Homo sapiens full open reading frame cDNA clone RZPDo834D1020D for gene ACTA1, actin, alpha 1, skeletal muscle; complete cds, incl. stopcodon P
CR541796.1 Homo sapiens full open reading frame cDNA clone RZPDo834B0631D for gene ACTA1, actin, alpha 1, skeletal muscle; complete cds, without stopcodon P
BC012597.1 Homo sapiens actin, alpha 1, skeletal muscle, mRNA (cDNA clone MGC:13546 IMAGE:4291656), complete cds PA
AK096902.1 Homo sapiens cDNA FLJ39583 fis, clone SKMUS2004897, highly similar to ACTIN, ALPHA SKELETAL MUSCLE P
AK300697.1 Homo sapiens cDNA FLJ53662 complete cds, highly similar to Actin, alpha skeletal muscle PA

EST sequences (10 of 727) [Show all sequences]

AA866018.1 Clone IMAGE:1459357 kidney 3' read A
AA970272.1 Clone IMAGE:1575199 kidney 3' read A
AA974659.1 Clone IMAGE:1574449 kidney 3' read A
AI092804.1 Clone IMAGE:1693105 heart 3' read PA
AI093052.1 Clone IMAGE:1694632 heart 3' read PA
AI140645.1 Clone IMAGE:1739693 lung 3' read
AI141546.1 Clone IMAGE:1694028 heart 3' read PA
R24091.1 Clone IMAGE:131505 placenta 5' read
BX116897.1 Clone IMAGp998K19670_;_IMAGE:299658 lung P
AI193510.1 Clone IMAGE:1744304 lung 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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