> Septin 11 (SEPT11)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:148021     UniGene Hs.128199     Homo sapiens (human)   SEPT11 Order cDNA clone, Links
Septin 11 (SEPT11)

Human protein-coding gene SEPT11. Represented by 768 ESTs from 310 cDNA libraries. Corresponds to reference sequence NM_018243.2. [UniGene 148021 - Hs.128199]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001100678.1 Sept11 gene product R. norvegicus 100.0 431
NP_001009818.1 septin-11 M. musculus 100.0 428
XP_003898775.1 PREDICTED: septin-11 P. anubis 100.0 428
XP_517208.3 PREDICTED: septin-11 isoform 2 P. troglodytes 100.0 428
NP_060713.1 SEPT11 gene product H. sapiens 100.0 428
XP_001491248.1 PREDICTED: septin-11 isoform 2 E. caballus 100.0 428
XP_003129144.1 PREDICTED: septin-11 S. scrofa 100.0 428
NP_001075916.1 SEPT11 gene product B. taurus 100.0 424
XP_535616.3 PREDICTED: septin-11 C. lupus familiaris 100.0 421
XP_001093263.2 PREDICTED: septin-11 isoform 1 M. mulatta 100.0 371
XP_002717144.1 PREDICTED: septin 11-like O. cuniculus 99.8 431
XP_001363178.2 PREDICTED: septin-11-like M. domestica 99.5 427
XP_420591.2 PREDICTED: septin-11 G. gallus 99.5 424
NP_001087655.1 septin 11 X. laevis 97.4 429
NP_997791.1 sept6 gene product D. rerio 90.9 426
NP_524417.1 septin 2, isoform A D. melanogaster 76.8 418
NP_001041198.1 Protein UNC-61, isoform c C. elegans 55.8 450
XP_962510.2 cell division control protein 3 N. crassa 50.8 386
Other hits (2 of 39) [Show all]SpeciesId(%)Len(aa)
XP_003205672.1 PREDICTED: septin-11-like M. gallopavo 99.3 424
XP_004010149.1 PREDICTED: septin-11 O. aries 99.0 485

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; mixed; uncharacterized tissue; kidney; placenta; skin; lung; liver; bladder; pineal gland; testis; connective tissue; heart; prostate; intestine; mammary gland; uterus; ascites; lymph node; spleen; stomach; eye; blood; thyroid; muscle; pharynx; vascular; bone; larynx; trachea; ear; bone marrow; umbilical cord; pancreas; adrenal gland; adipose tissue; thymus; mouth
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q21.1
UniSTS entry: Chr 4 D4S3151 [Map Viewer]
UniSTS entry: Chr 4 SHGC-50163
UniSTS entry: Chr 4 WI-20168 [Map Viewer]
UniSTS entry: D4S1491E
UniSTS entry: Chr 4 G33442
UniSTS entry: Chr 4 SHGC-24788 [Map Viewer]
UniSTS entry: Chr 4 SHGC-50546
UniSTS entry: Chr 4 SHGC-59798 [Map Viewer]
UniSTS entry: Chr 4 SHGC-8614
UniSTS entry: Chr 4 SHGC-59857
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

AL110300.1 Homo sapiens mRNA; cDNA DKFZp566C224 (from clone DKFZp566C224) PA
BX648411.1 Homo sapiens mRNA; cDNA DKFZp686H01235 (from clone DKFZp686H01235) A
AK124592.1 Homo sapiens cDNA FLJ42601 fis, clone BRACE3010438
BC063615.1 Homo sapiens septin 11, mRNA (cDNA clone MGC:74991 IMAGE:3848367), complete cds PA
BC064934.1 Homo sapiens cDNA clone IMAGE:6150586, partial cds PA
AK001711.1 Homo sapiens cDNA FLJ10849 fis, clone NT2RP4001414, highly similar to SEPTIN 2 HOMOLOG P
CR627457.1 Homo sapiens mRNA; cDNA DKFZp686M01112 (from clone DKFZp686M01112) A
NM_018243.2 Homo sapiens septin 11 (SEPT11), mRNA PA
AK027633.1 Homo sapiens cDNA FLJ14727 fis, clone NT2RP3001730, highly similar to SEPTIN 2 HOMOLOG P
AK027279.1 Homo sapiens cDNA FLJ14373 fis, clone HEMBA1001595, highly similar to SEPTIN 2 HOMOLOG P
BC008083.2 Homo sapiens septin 11, mRNA (cDNA clone MGC:927 IMAGE:2966709), complete cds PA
AK094473.1 Homo sapiens cDNA FLJ37154 fis, clone BRACE2026054, highly similar to SEPTIN 2 PA
AK302700.1 Homo sapiens cDNA FLJ53374 complete cds, highly similar to Septin-11 P
GU727629.1 Homo sapiens epididymis tissue protein Li 179 mRNA, complete cds P

EST sequences (10 of 768) [Show all sequences]

T05437.1 Clone HFBCY19 brain
AA970278.1 Clone IMAGE:1575211 kidney 3' read A
AA985228.1 Clone IMAGE:1629420 brain 3' read P
AI037848.1 Clone IMAGE:1664668 skin 3' read A
AI038658.1 Clone IMAGE:1658713 embryonic tissue 3' read A
AI073455.1 Clone IMAGE:1566118 mixed 3' read A
AI079352.1 Clone IMAGE:1677681 mixed 3' read
AI079864.1 Clone IMAGE:1678743 skin 3' read
AI129029.1 Clone IMAGE:1663297 skin 3' read
AI141593.1 Clone IMAGE:1694084 heart 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help