> Ring finger protein 13 (RNF13)
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UGID:132890     UniGene Hs.12333     Homo sapiens (human)   RNF13 Order cDNA clone, Links
Ring finger protein 13 (RNF13)

Human protein-coding gene RNF13. Represented by 648 ESTs from 267 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 132890 - Hs.12333]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003895008.1 PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 1 P. anubis 100.0 380
XP_001142115.1 PREDICTED: e3 ubiquitin-protein ligase RNF13 isoform 9 P. troglodytes 100.0 380
NP_899237.1 RNF13 gene product H. sapiens 100.0 380
XP_001108379.2 PREDICTED: RING finger protein 13 M. mulatta 100.0 244
NP_001106884.1 Rnf13 gene product M. musculus 97.1 380
NP_001083709.1 ring finger protein 13 precursor X. laevis 86.4 374
NP_957338.1 rnf13 gene product D. rerio 85.4 376
Other hits (2 of 30) [Show all]SpeciesId(%)Len(aa)
XP_534303.1 PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 1 C. lupus familiaris 99.0 380
NP_001069610.1 RNF13 gene product B. taurus 99.0 379

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; placenta; lung; kidney; stomach; uncharacterized tissue; mixed; testis; adrenal gland; eye; liver; lymph node; pituitary gland; mammary gland; muscle; mouth; skin; prostate; blood; connective tissue; pancreas; uterus; intestine; vascular; umbilical cord; embryonic tissue; bladder; adipose tissue; ovary; pharynx; heart; spleen; bone marrow; larynx; thymus; trachea; parathyroid; esophagus; ascites; cervix; thyroid; bone; ganglia; nerve; ear; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3q25.1
UniSTS entry: Chr 3 SHGC-77433 [Map Viewer]
UniSTS entry: Chr 3 RH25558
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AF070558.1 Homo sapiens clone 24450 RING zinc finger protein RZF mRNA, complete cds PA
NM_183381.2 Homo sapiens ring finger protein 13 (RNF13), transcript variant 4, mRNA P
NM_007282.4 Homo sapiens ring finger protein 13 (RNF13), transcript variant 1, mRNA P
CR456804.1 Homo sapiens full open reading frame cDNA clone RZPDo834C1118D for gene RNF13, ring finger protein 13; complete cds, incl. stopcodon P
BC009803.1 Homo sapiens ring finger protein 13, mRNA (cDNA clone MGC:13689 IMAGE:4274992), complete cds PA
BC009781.1 Homo sapiens ring finger protein 13, mRNA (cDNA clone MGC:13487 IMAGE:3683407), complete cds PA
AK313304.1 Homo sapiens cDNA, FLJ93817, Homo sapiens ring finger protein 13 (RNF13), mRNA P
AK090771.1 Homo sapiens cDNA FLJ33452 fis, clone BRAMY2000151, highly similar to RING finger protein 13 P
AK090638.1 Homo sapiens cDNA FLJ33319 fis, clone BNGH42007709, highly similar to RING finger protein 13 P
BC017878.1 Homo sapiens ring finger protein 13, mRNA (cDNA clone IMAGE:4271414), partial cds PA
AF037204.1 Homo sapiens RING zinc finger protein (RZF) mRNA, complete cds PA

EST sequences (10 of 648) [Show all sequences]

AA962265.1 Clone IMAGE:1602162 lung 3' read
AA903059.1 Clone IMAGE:1517509 uncharacterized tissue 3' read P
AA972863.1 Clone IMAGE:1578741 mixed 3' read A
AA975327.1 Clone IMAGE:1558898 lung 3' read
AA995245.1 Clone IMAGE:1626544 mixed 3' read A
AI031720.1 Clone IMAGE:1668779 brain 3' read A
AI042382.1 Clone IMAGE:1660910 mixed 3' read
BX105451.1 Clone IMAGp998N15786_;_IMAGE:344270 heart
AI186036.1 Clone IMAGE:1742428 lung 3' read A
AI188966.1 Clone IMAGE:1724443 placenta 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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