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Finding cDNAs
UGID:132880     UniGene Hs.12313     Homo sapiens (human)   C3orf39 Order cDNA clone, Links
Chromosome 3 open reading frame 39 (C3orf39)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_001012742.1 glycosyltransferase precursor P. troglodytes 100.0 579
NP_116195.2 glycosyltransferase precursor H. sapiens 100.0 579
XP_001108195.1 PREDICTED: similar to glycosyltransferase M. mulatta 99.6 469
NP_705768.4 glycosyltransferase M. musculus 96.2 579
NP_001086091.1 glycosyltransferase precursor X. laevis 80.6 577
NP_001012384.1 glycosyltransferase precursor D. rerio 79.8 577

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; cervix; eye; testis; kidney; embryonic tissue; spleen; skin; thyroid; uterus; placenta; ovary; lung; mixed; pituitary gland; intestine; blood; bone marrow; connective tissue; liver; bone; heart
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3p22.1
UniSTS entry: Chr 3 WI-14339
UniSTS entry: Chr 3 G59721
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AK124737.1 Homo sapiens cDNA FLJ42747 fis, clone BRAWH3000314, highly similar to Homo sapiens glycosyltransferase (AGO61), mRNA P
BC060861.1 Homo sapiens chromosome 3 open reading frame 39, mRNA (cDNA clone MGC:71796 IMAGE:30335722), complete cds PA
CR608627.1 full-length cDNA clone CL0BB020ZG03 of Neuroblastoma of Homo sapiens (human) P
CR606513.1 full-length cDNA clone CS0DK011YN07 of HeLa cells Cot 25-normalized of Homo sapiens (human) P
BC004508.2 Homo sapiens chromosome 3 open reading frame 39, mRNA (cDNA clone IMAGE:3926450), with apparent retained intron PA
AK027472.1 Homo sapiens cDNA FLJ14566 fis, clone NT2RM4000324 P
NM_032806.4 Homo sapiens chromosome 3 open reading frame 39 (C3orf39), mRNA PA
BC021220.2 Homo sapiens chromosome 3 open reading frame 39, mRNA (cDNA clone IMAGE:4301317), with apparent retained intron PA
AK092147.1 Homo sapiens cDNA FLJ34828 fis, clone NT2NE2009295 P

EST sequences (10 of 154) [Show all sequences]

AA921803.1 Clone IMAGE:1543502 mixed 3' read A
AI150326.1 Clone IMAGE:1752503 testis 3' read A
BX114453.1 Clone IMAGp998G1372_;_IMAGE:22739 brain A
AI221391.1 Clone IMAGE:1842606 mixed 3' read A
AI274863.1 Clone IMAGE:1877975 mixed 3' read A
AI301221.1 Clone IMAGE:1894232 placenta 3' read A
AI347033.1 Clone IMAGE:1926873 intestine 3' read A
T07940.1 Clone HHCF66 brain P
T07941.1 Clone HHCF66 brain P
AI377035.1 Clone IMAGE:2065980 embryonic tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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