> RAB3B, member RAS oncogene family (RAB3B)
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UGID:146406     UniGene Hs.123072     Homo sapiens (human)   RAB3B Order cDNA clone, Links
RAB3B, member RAS oncogene family (RAB3B)

Human protein-coding gene RAB3B. Represented by 256 ESTs from 132 cDNA libraries. Corresponds to reference sequence NM_002867.3. [UniGene 146406 - Hs.123072]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001111269.1 PREDICTED: ras-related protein Rab-3B-like M. mulatta 100.0 218
XP_001143400.1 PREDICTED: ras-related protein Rab-3B P. troglodytes 100.0 218
NP_002858.2 RAB3B gene product H. sapiens 100.0 218
XP_002715144.1 PREDICTED: RAB3B, member RAS oncogene family-like O. cuniculus 99.5 218
NP_076026.1 Rab3b gene product M. musculus 99.1 218
NP_001086320.1 RAB3B, member RAS oncogene family X. laevis 89.4 216
NP_523687.1 Rab3 D. melanogaster 86.4 219
NP_001017761.1 rab3ab gene product D. rerio 86.4 219
NP_001021973.1 Protein RAB-3, isoform a C. elegans 85.8 231
XP_001703081.1 small rab-related GTPase C. reinhardtii 57.4 204
NP_001078248.1 Ras-related protein ARA-3 A. thaliana 56.4 204
XP_962242.1 GTP-binding protein SAS1 N. crassa 56.0 193
NP_116615.1 Ypt1p S. cerevisiae 54.9 173
Other hits (2 of 66) [Show all]SpeciesId(%)Len(aa)
XP_001493964.2 PREDICTED: ras-related protein Rab-3B-like E. caballus 99.1 218
NP_776872.1 RAB3B gene product B. taurus 99.1 218

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; pancreas; placenta; lung; embryonic tissue; prostate; mixed; kidney; intestine; adrenal gland; thyroid; pituitary gland; testis; uncharacterized tissue; liver; connective tissue; bone; skin; mouth; eye; ear; vascular; bone marrow; epididymis; mammary gland; amniotic fluid; muscle; nerve; heart
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p32-p31
UniSTS entry: Chr 1 SHGC-36782
UniSTS entry: Chr 1 SHGC-74815 [Map Viewer]
UniSTS entry: Chr 1 RH36067 [Map Viewer]
UniSTS entry: Chr 1 SHGC-74822 [Map Viewer]
UniSTS entry: Chr 1 D11S3114
UniSTS entry: Chr 1 D8S2278
UniSTS entry: Chr 1 D1S1425
UniSTS entry: Chr 1 SHGC-74814 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

NM_002867.3 Homo sapiens RAB3B, member RAS oncogene family (RAB3B), mRNA PA
AK002107.1 Homo sapiens cDNA FLJ11245 fis, clone PLACE1008629
AB074163.1 Homo sapiens primary neuroblastoma cDNA, clone:Nbla04145, full insert sequence
M28214.1 Homo sapiens GTP-binding protein (RAB3B) mRNA, complete cds P
BC005035.1 Homo sapiens RAB3B, member RAS oncogene family, mRNA (cDNA clone MGC:12720 IMAGE:4040566), complete cds PA
AK291653.1 Homo sapiens cDNA FLJ77324 complete cds, highly similar to Homo sapiens RAB3B, member RAS oncogene family (RAB3B), mRNA P
AF498932.1 Homo sapiens small GTP binding protein RAB3B (RAB3B) mRNA, complete cds P
AK092167.1 Homo sapiens cDNA FLJ34848 fis, clone NT2NE2011684, weakly similar to H.sapiens mRNA for plakophilin 2a and b

EST sequences (10 of 256) [Show all sequences]

AA902758.1 Clone IMAGE:1519115 uncharacterized tissue 3' read A
AI042261.1 Clone IMAGE:1664992 skin 3' read A
AI091510.1 Clone IMAGE:1567004 mixed 3' read A
AI087412.1 Clone IMAGE:1680924 skin 3' read
BX111934.1 Clone IMAGp998H08223_;_IMAGE:147127 placenta
BX118500.1 Clone IMAGp998P03136_;_IMAGE:130034 mixed
BX091219.1 Clone IMAGp998I18214_;_IMAGE:143705 placenta
AI188771.1 Clone IMAGE:1723901 placenta 3' read A
CB107139.1 Clone L3SNU475-13-G05 liver 5' read P
CB149950.1 Clone L15CKK1-49-E02 liver 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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