Cyclin N-terminal domain containing 1 (CNTD1)

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UGID:132869 UniGene Hs.12272 Homo sapiens (human) CNTD1

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Cyclin N-terminal domain containing 1 (CNTD1)

Human protein-coding gene CNTD1. Represented by 149 ESTs from 79 cDNA libraries. Corresponds to reference sequence NM_173478.2. [UniGene 132869 - Hs.12272]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_775749.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	CNTD1 gene product	H. sapiens	100.0	329
NP_001085751.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	beclin-1	X. laevis	93.2	161
NP_080838.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Cntd1 gene product	M. musculus	91.0	333
NP_651209.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Autophagy-specific gene 6	D. melanogaster	71.6	155
XP_001920424.3 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: cyclin N-terminal domain-containing protein 1-like, partial	D. rerio	49.0	241
Other hits (2 of 40) [Show all]		Species	Id(%)	Len(aa)
XP_003315534.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: LOW QUALITY PROTEIN: cyclin N-terminal domain-containing protein 1	P. troglodytes	99.1	331
XP_003913160.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: cyclin N-terminal domain-containing protein 1	P. anubis	98.2	329

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	testis; mixed; mammary gland; thyroid; uterus; intestine; brain; heart; thymus; lung; uncharacterized tissue; ascites; prostate; placenta; liver; eye; kidney; connective tissue; vascular; skin; lymph node; ganglia; lymph; bone; ovary; blood; larynx

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	17
Map position:	17q21.31
UniSTS entry:	Chr 17	A005R43
UniSTS entry:	Chr 17	G20453
UniSTS entry:	Chr 17	RH17649
UniSTS entry:	Chr 17	WI-11793	[Map Viewer]
UniSTS entry:	Chr 17	STS-U17909

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

NM_173478.2	Homo sapiens cyclin N-terminal domain containing 1 (CNTD1), mRNA	PA
AK097456.1	Homo sapiens cDNA FLJ40137 fis, clone TESTI2012776	P
AL833052.1	Homo sapiens mRNA; cDNA DKFZp666H229 (from clone DKFZp666H229)	PA
BC026187.2	Homo sapiens cyclin N-terminal domain containing 1, mRNA (cDNA clone MGC:33268 IMAGE:5267540), complete cds	PA
AK302094.1	Homo sapiens cDNA FLJ50910 complete cds	P

EST sequences (10 of 149) [Show all sequences]

AI138317.1	Clone IMAGE:1736283	testis	3' read	PA
AI150202.1	Clone IMAGE:1752428	testis	3' read	P
BX096618.1	Clone IMAGp998O214453_;_IMAGE:1752428	testis		P
AI190582.1	Clone IMAGE:1733902	testis	3' read	PA
R27348.1	Clone IMAGE:133460	placenta	5' read
R27842.1	Clone IMAGE:133712	placenta	5' read
CB111046.1	Clone L5HLK1-9-H05	liver	5' read
CB104986.1	Clone S11SNU1-26-G02	ascites	5' read	P
AI240077.1	Clone IMAGE:1847559	mixed	3' read	A
AI475295.1	Clone IMAGE:2153481	intestine	3' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria