Centrin, EF-hand protein, 1 (CETN1)

Restricted Expression:

testis [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO Profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

testis; brain; placenta; uncharacterized tissue; mixed

NCBI

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UGID:146279 UniGene Hs.122511 Homo sapiens (human) CETN1

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Centrin, EF-hand protein, 1 (CETN1)

Human protein-coding gene CETN1. Represented by 52 ESTs from 12 cDNA libraries. EST representation biased toward testis. Corresponds to reference sequence NM_004066.1. [UniGene 146279 - Hs.122511]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_004057.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	CETN1 gene product	H. sapiens	100.0	171
NP_031619.3 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Cetn1 gene product	M. musculus	94.2	171
XP_002667227.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: centrin-1	D. rerio	86.0	170
NP_001080127.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	centrin, EF-hand protein, 1	X. laevis	85.5	171
XP_001699499.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	centrin	C. reinhardtii	75.6	159
NP_724103.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	CG31802	D. melanogaster	63.7	182
NP_014900.3 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Cdc31p	S. cerevisiae	59.9	142
NP_190605.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	putative calcium-binding protein CML20	A. thaliana	58.1	160
NP_503386.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Protein CMD-1	C. elegans	55.2	143
Other hits (2 of 66) [Show all]		Species	Id(%)	Len(aa)
XP_523881.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: centrin-1	P. troglodytes	98.8	171
XP_001089502.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: centrin-1	M. mulatta	97.7	171

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	18
Map position:	18p11.32
UniSTS entry:	Chr 18	RH35650
UniSTS entry:	Chr 18	CETN1_4560

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

NM_004066.1	Homo sapiens centrin, EF-hand protein, 1 (CETN1), mRNA	P
AK312047.1	Homo sapiens cDNA, FLJ92326, Homo sapiens centrin, EF-hand protein, 1 (CETN1), mRNA	P
BC029515.1	Homo sapiens centrin, EF-hand protein, 1, mRNA (cDNA clone MGC:33791 IMAGE:5297994), complete cds	PA
U03270.1	Homo sapiens centrin mRNA, complete cds	P

EST sequences (10 of 52) [Show all sequences]

AI125275.1	Clone IMAGE:1736923	testis	3' read	P
BX093850.1	Clone IMAGp998L084456_;_IMAGE:1753495	testis
BX090760.1	Clone IMAGp998I143734_;_IMAGE:1476181	uncharacterized tissue		P
AI198628.1	Clone IMAGE:1753495	testis	3' read	A
BX360849.2	Clone CS0DI076YI13	placenta	3' read	P
BX360850.2	Clone CS0DI076YI13	placenta	5' read	P
BX370117.2	Clone CS0DI076YI13	placenta	5' read
BX382178.2	Clone CS0DI076YG15	placenta	3' read	P
BX382179.2	Clone CS0DI076YG15	placenta	5' read	P
CV024660.1		mixed	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria