StAR-related lipid transfer (START) domain containing 9 (STARD9)

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UGID:146135 UniGene Hs.122061 Homo sapiens (human) STARD9

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StAR-related lipid transfer (START) domain containing 9 (STARD9)

Human protein-coding gene STARD9. Represented by 124 ESTs from 69 cDNA libraries. Corresponds to reference sequence NM_020759.2. [UniGene 146135 - Hs.122061]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_065810.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	STARD9 gene product	H. sapiens	100.0	4699
XP_001921905.3 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: stAR-related lipid transfer protein 9-like	D. rerio	60.6	2158
NP_001247339.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Kinesin-like protein at 98A, isoform B	D. melanogaster	52.6	340
NP_001074602.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Kif16b gene product	M. musculus	51.9	474
NP_001138546.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	kinesin family member 13B	X. laevis	47.9	326
XP_961491.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	hypothetical protein NCU03715	N. crassa	47.3	353
NP_508546.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Protein KLP-4, isoform c	C. elegans	46.2	279
Other hits (2 of 40) [Show all]		Species	Id(%)	Len(aa)
XP_001144280.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: stAR-related lipid transfer protein 9	P. troglodytes	98.7	4703
XP_003900889.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: stAR-related lipid transfer protein 9-like, partial	P. anubis	92.5	4512

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; testis; mixed; uncharacterized tissue; intestine; nerve; mammary gland; larynx; eye; embryonic tissue; prostate; lung; thymus; uterus; kidney; muscle; connective tissue; heart; adipose tissue; lymph node; ganglia

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	15
Map position:	15q15.2
UniSTS entry:	Chr 15	RH93705
UniSTS entry:	Chr 15	D15S810
UniSTS entry:	Chr 15	RH15755	[Map Viewer]
UniSTS entry:	Chr 1	RH80030
UniSTS entry:	Chr 1	D11S2560
UniSTS entry:	Chr 15	STARD9__5334.2
UniSTS entry:	Chr 15	sts-Z47043	[Map Viewer]
UniSTS entry:	Chr 15	D15S809
UniSTS entry:	Chr 1	RH80031

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

BX648326.1	Homo sapiens mRNA; cDNA DKFZp686P19131 (from clone DKFZp686P19131)	A
AK124695.1	Homo sapiens cDNA FLJ42705 fis, clone BRAMY3006297
AK122666.1	Homo sapiens cDNA FLJ16106 fis, clone THYMU1000496, moderately similar to KINESIN-LIKE PROTEIN KIF1C	P
AB037721.1	Homo sapiens mRNA for KIAA1300 protein, partial cds	P
AL133579.1	Homo sapiens mRNA; cDNA DKFZp434N1272 (from clone DKFZp434N1272); partial cds	PA
CR627426.1	Homo sapiens mRNA; cDNA DKFZp686O248 (from clone DKFZp686O248)	PA
CR749416.1	Homo sapiens mRNA; cDNA DKFZp781J069 (from clone DKFZp781J069)	PA
NM_020759.2	Homo sapiens StAR-related lipid transfer (START) domain containing 9 (STARD9), mRNA	P
CR936665.1	Homo sapiens mRNA; cDNA DKFZp686M208 (from clone DKFZp686M208)	PA
AK297603.1	Homo sapiens cDNA FLJ58093 complete cds, highly similar to StAR-related lipid transfer protein 9	P
AK025589.1	Homo sapiens cDNA: FLJ21936 fis, clone HEP04408	PA

EST sequences (10 of 124) [Show all sequences]

AA977205.1	Clone IMAGE:1587405	uncharacterized tissue	3' read
R16857.1	Clone IMAGE:29247	brain	5' read
R17349.1	Clone IMAGE:32094	brain	5' read
AA926988.1	Clone IMAGE:1542152	mixed	3' read
AI083560.1	Clone IMAGE:1662548	mixed	3' read	A
AI139927.1	Clone IMAGE:1691898	heart	3' read	P
BX093327.1	Clone IMAGp998G16146_;_IMAGE:29247	brain		A
AI215600.1	Clone IMAGE:1845015	mixed	3' read
AI377197.1	Clone IMAGE:2064033	mixed	3' read
R42697.1	Clone IMAGE:32094	brain	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria