> Vanin 1 (VNN1)
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UGID:132835     UniGene Hs.12114     Homo sapiens (human)   VNN1 Order cDNA clone, Links
Vanin 1 (VNN1)

Human protein-coding gene VNN1. Represented by 50 ESTs from 28 cDNA libraries. EST representation biased toward neonate. Corresponds to reference sequence NM_004666.2. [UniGene 132835 - Hs.12114]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_004657.2 VNN1 gene product H. sapiens 100.0 512
XP_001169280.1 PREDICTED: pantetheinase P. troglodytes 99.8 512
NP_035834.2 pantetheinase precursor M. musculus 79.6 506
NP_001039309.1 btd gene product D. rerio 56.2 290
Other hits (2 of 23) [Show all]SpeciesId(%)Len(aa)
XP_003898219.1 PREDICTED: pantetheinase-like P. anubis 95.0 397
XP_001102153.1 PREDICTED: pantetheinase M. mulatta 94.9 512

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: neonate [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: kidney; liver; blood; uterus; pancreas; ovary; mouth; uncharacterized tissue; bone marrow; lung; connective tissue; stomach; lymph node; placenta; muscle; bone; intestine
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6q23-q24
UniSTS entry: Chr 6 VNN1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AJ132099.1 Homo sapiens mRNA for VNN1 protein P
NM_004666.2 Homo sapiens vanin 1 (VNN1), mRNA P
U39664.1 Homo sapiens Tiff66 mRNA, complete cds P
BC096265.3 Homo sapiens vanin 1, mRNA (cDNA clone MGC:116930 IMAGE:40006204), complete cds P
BC096267.3 Homo sapiens vanin 1, mRNA (cDNA clone MGC:116932 IMAGE:40006207), complete cds P
BC096268.1 Homo sapiens vanin 1, mRNA (cDNA clone MGC:116933 IMAGE:40006208), complete cds P
BC096266.3 Homo sapiens vanin 1, mRNA (cDNA clone MGC:116931 IMAGE:40006205), complete cds P
AK290425.1 Homo sapiens cDNA FLJ77936 complete cds, highly similar to Homo sapiens mRNA for VNN1 protein P
AK314265.1 Homo sapiens cDNA, FLJ95014, highly similar to Homo sapiens vanin 1 (VNN1), mRNA P

EST sequences (10 of 50) [Show all sequences]

AA983530.1 Clone IMAGE:1553696 kidney 3' read A
BX111559.1 Clone IMAGp998A195763_;_IMAGE:2323482 pancreas A
AI253190.1 Clone IMAGE:2029250 kidney 3' read A
AI433356.1 Clone IMAGE:2138947 kidney 3' read A
AI478364.1 Clone IMAGE:2161068 kidney 3' read A
AI732613.1 Clone IMAGE:593791 ovary 3' read A
AI793023.1 Clone IMAGE:2029250 kidney 5' read
AI793191.1 Clone IMAGE:2029250 kidney 3' read
AI863511.1 Clone IMAGE:2386279 kidney 3' read A
BX329034.2 Clone CS0DI003YF20 placenta 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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