Tu translation elongation factor, mitochondrial (TUFM)

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UGID:132827 UniGene Hs.12084 Homo sapiens (human) TUFM

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Tu translation elongation factor, mitochondrial (TUFM)

Human protein-coding gene TUFM. Represented by 1154 ESTs from 305 cDNA libraries. Corresponds to reference sequence NM_003321.4. [UniGene 132827 - Hs.12084]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
XP_510904.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: elongation factor Tu, mitochondrial isoform 3	P. troglodytes	100.0	454
NP_003312.3 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	TUFM gene product	H. sapiens	100.0	454
NP_766333.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Tufm gene product	M. musculus	98.0	451
NP_001013523.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	tufm gene product	D. rerio	81.6	446
NP_524752.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	elongation factor Tu mitochondrial, isoform A	D. melanogaster	71.3	474
NP_014830.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Tuf1p	S. cerevisiae	71.3	435
NP_497623.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Protein TUFM-1	C. elegans	68.9	440
NP_192202.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Elongation factor Tu	A. thaliana	67.7	399
XP_001696344.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	mitochondrial translation factor Tu	C. reinhardtii	66.1	394
XP_961513.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	elongation factor Tu, mitochondrial precursor	N. crassa	66.1	436
Other hits (2 of 59) [Show all]		Species	Id(%)	Len(aa)
XP_001103519.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: elongation factor Tu, mitochondrial isoform 3	M. mulatta	99.1	454
XP_003916770.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: elongation factor Tu, mitochondrial	P. anubis	99.1	454

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; lung; skin; testis; placenta; pancreas; liver; intestine; eye; prostate; embryonic tissue; ovary; mammary gland; ascites; uterus; kidney; uncharacterized tissue; lymph; mixed; blood; pineal gland; lymph node; pharynx; larynx; muscle; heart; bone; stomach; tonsil; thyroid; connective tissue; adrenal gland; bladder; cervix; mouth; salivary gland; bone marrow; vascular; parathyroid; spleen; pituitary gland; esophagus; adipose tissue; amniotic fluid; thymus; epididymis

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	16
Map position:	16p11.2
UniSTS entry:	Chr 16	HSC0MH022	[Map Viewer]
UniSTS entry:	Chr 16	RH11620

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

NM_003321.4	Homo sapiens Tu translation elongation factor, mitochondrial (TUFM), nuclear gene encoding mitochondrial protein, mRNA	PA
BC001633.1	Homo sapiens Tu translation elongation factor, mitochondrial, mRNA (cDNA clone MGC:1592 IMAGE:3536952), complete cds	PA
L38995.1	Homo sapiens nuclear-encoded mitochondrial elongation factor Tu mRNA, complete cds	P
BC010041.2	Homo sapiens Tu translation elongation factor, mitochondrial, mRNA (cDNA clone MGC:19753 IMAGE:3629164), complete cds	PA
S75463.1	P43=mitochondrial elongation factor homolog [human, liver, mRNA, 1644 nt]	P
X84694.1	H.sapiens mRNA for elongations factor Tu-mitochondrial	PA

EST sequences (10 of 1154) [Show all sequences]

AA974346.1	Clone IMAGE:1586336	uncharacterized tissue	3' read	A
AA983218.1	Clone IMAGE:1590735	kidney	3' read
AA988319.1	Clone IMAGE:1607052	mammary gland	3' read
AA989498.1	Clone IMAGE:1606263	kidney	3' read	P
AA991819.1	Clone IMAGE:1619716	testis	3' read
AA993166.1	Clone IMAGE:1622802	embryonic tissue	3' read	PA
AA993670.1	Clone IMAGE:1624682	embryonic tissue	3' read	P
AA887570.1	Clone IMAGE:1500935	kidney	3' read
AI005580.1	Clone IMAGE:1641535	testis	3' read	P
AI018058.1	Clone IMAGE:1642106	testis	3' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria