> ATP-binding cassette, sub-family E (OABP), member 1 (ABCE1)
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UGID:132814     UniGene Hs.12013     Homo sapiens (human)   ABCE1 Order cDNA clone, Links
ATP-binding cassette, sub-family E (OABP), member 1 (ABCE1)

Human protein-coding gene ABCE1. Represented by 650 ESTs from 247 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 132814 - Hs.12013]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_056566.2 ATP-binding cassette sub-family E member 1 M. musculus 100.0 598
NP_001101916.1 ATP-binding cassette sub-family E member 1 R. norvegicus 100.0 598
XP_001367058.1 PREDICTED: ATP-binding cassette sub-family E member 1-like isoform 1 M. domestica 100.0 598
XP_001095781.1 PREDICTED: ATP-binding cassette sub-family E member 1 isoform 1 M. mulatta 100.0 598
XP_003899278.1 PREDICTED: ATP-binding cassette sub-family E member 1-like P. anubis 100.0 598
NP_001233538.1 ABCE1 gene product P. troglodytes 100.0 598
NP_002931.2 ABCE1 gene product H. sapiens 100.0 598
XP_867212.2 PREDICTED: ATP-binding cassette sub-family E member 1 isoform 4 C. lupus familiaris 100.0 598
XP_001501999.1 PREDICTED: ATP-binding cassette sub-family E member 1 E. caballus 100.0 598
NP_001077154.1 ABCE1 gene product B. taurus 100.0 598
XP_004017271.1 PREDICTED: ATP-binding cassette sub-family E member 1 O. aries 100.0 598
XP_002716973.1 PREDICTED: ATP-binding cassette, sub-family E, member 1 O. cuniculus 100.0 598
XP_003129218.3 PREDICTED: ATP-binding cassette sub-family E member 1 S. scrofa 99.8 598
XP_003205467.1 PREDICTED: ATP-binding cassette sub-family E member 1-like M. gallopavo 99.7 598
XP_002188739.1 PREDICTED: ATP-binding cassette sub-family E member 1 isoform 1 T. guttata 99.5 598
NP_001006440.1 ABCE1 gene product G. gallus 99.5 598
NP_001080761.1 ATP-binding cassette, sub-family E (OABP), member 1 X. laevis 95.8 598
NP_998216.2 ATP-binding cassette sub-family E member 1 D. rerio 94.3 598
NP_648272.1 pixie, isoform A D. melanogaster 82.9 597
NP_193656.2 ABC transporter E family member 2 A. thaliana 79.7 604
XP_963869.2 hypothetical protein NCU03061 N. crassa 76.0 600
NP_010376.3 Rli1p S. cerevisiae 75.4 605
XP_001696778.1 hypothetical protein CHLREDRAFT_119356 C. reinhardtii 75.0 392
NP_499717.1 Protein ABCE-1 C. elegans 73.5 593
Other hits (2 of 43) [Show all]SpeciesId(%)Len(aa)
XP_003221699.1 PREDICTED: ATP-binding cassette sub-family E member 1-like isoform 1 A. carolinensis 99.0 598
NP_001005628.1 abce1 gene product X. tropicalis 96.7 598

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; embryonic tissue; prostate; uncharacterized tissue; liver; intestine; heart; parathyroid; connective tissue; ear; lymph; cervix; adipose tissue; trachea; placenta; kidney; blood; bladder; epididymis; pharynx; uterus; mixed; thyroid; umbilical cord; thymus; bone marrow; lung; spleen; mammary gland; pancreas; skin; eye; lymph node; vascular; esophagus; muscle; mouth; salivary gland; ascites; bone; stomach; adrenal gland; ovary; larynx; ganglia
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q31
UniSTS entry: Chr 7 RH70908
UniSTS entry: Chr 1 GDB:451571
UniSTS entry: Chr 1 RH104489
UniSTS entry: Chr 1 SHGC-50255
UniSTS entry: Chr 1 ABCE1
UniSTS entry: Chr 1 D8S2278
UniSTS entry: Chr 1 GDB:434012
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

BT009779.1 Homo sapiens ATP-binding cassette, sub-family E (OABP), member 1 mRNA, complete cds P
AK123593.1 Homo sapiens cDNA FLJ41599 fis, clone CTONG2025513, highly similar to Mus musculus ATP-binding cassette, sub-family E (OABP), member 1 (Abce1) P
NM_002940.2 Homo sapiens ATP-binding cassette, sub-family E (OABP), member 1 (ABCE1), transcript variant 1, mRNA P
X76388.1 H.sapiens mRNA for 2-5A binding protein PA
X74987.1 H.sapiens mRNA for 2'-5' oligoadenylate binding protein PA
NM_001040876.1 Homo sapiens ATP-binding cassette, sub-family E (OABP), member 1 (ABCE1), transcript variant 2, mRNA P
BC016988.1 Homo sapiens, clone IMAGE:4396587, mRNA, partial cds PA
BC016283.1 Homo sapiens ATP-binding cassette, sub-family E (OABP), member 1, mRNA (cDNA clone MGC:9023 IMAGE:3909151), complete cds PA
AK315198.1 Homo sapiens cDNA, FLJ96183 P
AB062293.1 Homo sapiens OK/SW-cl.40 mRNA for ATP-binding cassette sub-family E member 1, complete cds PA

EST sequences (10 of 650) [Show all sequences]

AI002002.1 Clone IMAGE:1619466 testis 3' read A
AI002355.1 Clone IMAGE:1593311 kidney 3' read A
AI091521.1 Clone IMAGE:1567016 mixed 3' read
CB047528.1 Clone IMAGE:3253316 kidney 3' read A
CB047529.1 Clone IMAGE:3253316 kidney 5' read
BX116792.1 Clone IMAGp998H08121_;_IMAGE:124471 mixed PA
AI191936.1 Clone IMAGE:1734145 testis 3' read A
AI205870.1 Clone IMAGE:1756446 lung 3' read A
AI219786.1 Clone IMAGE:1841211 mixed 3' read A
AI220509.1 Clone IMAGE:1838474 testis 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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