> Homeobox C13 (HOXC13)
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UGID:145304     UniGene Hs.118608     Homo sapiens (human)   HOXC13 Order cDNA clone, Links
Homeobox C13 (HOXC13)

Human protein-coding gene HOXC13. Represented by 34 ESTs from 18 cDNA libraries. Corresponds to reference sequence NM_017410.2. [UniGene 145304 - Hs.118608]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_522408.2 PREDICTED: homeobox protein Hox-C13 P. troglodytes 100.0 329
NP_059106.2 HOXC13 gene product H. sapiens 100.0 329
XP_003906545.1 PREDICTED: homeobox protein Hox-C13 P. anubis 100.0 288
XP_002711177.1 PREDICTED: homeobox C13-like O. cuniculus 100.0 190
NP_034594.1 Hoxc13 gene product M. musculus 99.4 327
NP_571618.1 hoxc13a gene product D. rerio 81.0 305
NP_001079321.1 homeobox A13 X. laevis 62.8 293
Other hits (2 of 18) [Show all]SpeciesId(%)Len(aa)
XP_001107932.1 PREDICTED: homeobox protein Hox-C13 M. mulatta 99.4 328
XP_003355469.1 PREDICTED: homeobox protein Hox-C13-like S. scrofa 99.1 331

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: cervix; heart; uncharacterized tissue; uterus; mouth; eye; placenta; mammary gland; mixed; skin; pancreas; ascites; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12q13.3
UniSTS entry: Chr 12 STS-AA024448 [Map Viewer]
UniSTS entry: Chr 12 RH122467
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

BT009908.1 Homo sapiens homeo box C13 mRNA, complete cds P
NM_017410.2 Homo sapiens homeobox C13 (HOXC13), mRNA PA
AF255676.1 Homo sapiens homeoprotein C13 (HOXC13) mRNA, complete cds PA
AF263466.2 Homo sapiens HOXC13 (HOXC13) mRNA, complete cds PA
BC090850.1 Homo sapiens homeobox C13, mRNA (cDNA clone MGC:102689 IMAGE:6171228), complete cds PA
AK024027.1 Homo sapiens cDNA FLJ13965 fis, clone Y79AA1001391, moderately similar to HOMEOBOX PROTEIN HOX-A13 P
X99679.1 H.sapiens mRNA for HOXC13 protein

EST sequences (10 of 34) [Show all sequences]

BX094352.1 Clone IMAGp998H12841_;_IMAGE:365243 heart A
AI223853.1 Clone IMAGE:1858324 mixed 3' read A
AI497862.1 Clone IMAGE:2125884 mixed 3' read A
AI583687.1 Clone IMAGE:2239550 uncharacterized tissue 3' read A
AI811286.1 Clone IMAGE:2237817 uncharacterized tissue 3' read A
AI917373.1 Clone IMAGE:2237910 uncharacterized tissue 3' read A
BX350407.2 Clone CS0DK002YP12 cervix 3' read
BX389986.1 Clone CS0DK002YP12 cervix 5' read P
BX389987.1 Clone CS0DK002YP12 cervix 5' read P
BE066204.1 mammary gland


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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