> Actin, alpha, cardiac muscle 1 (ACTC1)
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UGID:145217     UniGene Hs.118127     Homo sapiens (human)   ACTC1 Order cDNA clone, Links
Actin, alpha, cardiac muscle 1 (ACTC1)

Human protein-coding gene ACTC1. Represented by 363 ESTs from 79 cDNA libraries. EST representation biased toward kidney tumor. Corresponds to reference sequence NM_005159.4. [UniGene 145217 - Hs.118127]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_033738.1 Actc1 gene product M. musculus 100.0 376
NP_062056.1 Actc1 gene product R. norvegicus 100.0 376
XP_001370562.1 PREDICTED: actin, alpha cardiac muscle 1-like isoform 1 M. domestica 100.0 376
XP_003214525.1 PREDICTED: actin, alpha cardiac muscle 1-like isoform 1 A. carolinensis 100.0 376
XP_003962484.1 PREDICTED: actin, alpha cardiac-like isoform 1 T. rubripes 100.0 376
XP_002200536.1 PREDICTED: actin, alpha cardiac muscle 1 T. guttata 100.0 376
NP_001002066.1 zgc:86709 gene product D. rerio 100.0 376
XP_003442991.1 PREDICTED: actin, alpha cardiac muscle 1-like isoform 1 O. niloticus 100.0 376
NP_001085220.1 actin, alpha 1, skeletal muscle X. laevis 100.0 376
NP_989094.1 actc1 gene product X. tropicalis 100.0 376
NP_001072949.1 actin, alpha cardiac muscle 1 G. gallus 100.0 376
XP_003206599.1 PREDICTED: actin, alpha cardiac muscle 1 M. gallopavo 100.0 376
XP_003900784.1 PREDICTED: actin, alpha cardiac muscle 1 isoform 1 P. anubis 100.0 376
XP_510285.1 PREDICTED: actin, alpha cardiac muscle 1 isoform 3 P. troglodytes 100.0 376
NP_005150.1 ACTC1 gene product H. sapiens 100.0 376
XP_535424.1 PREDICTED: actin, alpha cardiac muscle 1 isoform 3 C. lupus familiaris 100.0 376
XP_001503700.1 PREDICTED: actin, alpha cardiac muscle 1 isoform 1 E. caballus 100.0 376
NP_001163988.1 ACTC1 gene product S. scrofa 100.0 376
NP_001029757.1 ACTC1 gene product B. taurus 100.0 376
XP_002718044.1 PREDICTED: cardiac muscle alpha actin 1 proprotein-like O. cuniculus 100.0 376
NP_001142321.1 uncharacterized protein LOC100274491 Z. mays 99.7 376
NP_001188195.1 actin alpha sarcomeric/cardiac I. punctatus 99.7 376
NP_001133115.1 fast myotomal muscle actin 2 S. salar 99.7 376
NP_001098276.1 acta1 gene product O. latipes 99.7 376
XP_002802173.1 PREDICTED: actin, alpha skeletal muscle-like isoform 2 M. mulatta 99.7 376
XP_004021390.1 PREDICTED: actin, alpha skeletal muscle isoform 1 O. aries 99.7 376
NP_511052.1 actin 5C, isoform B D. melanogaster 97.1 375
NP_508841.1 Protein ACT-4, isoform a C. elegans 96.8 375
XP_001699068.1 actin C. reinhardtii 94.2 376
NP_187818.1 actin-11 A. thaliana 93.1 376
NP_116614.1 actin S. cerevisiae 90.9 373
XP_961133.2 actin N. crassa 90.4 373
Other hits (2 of 46) [Show all]SpeciesId(%)Len(aa)
XP_002132052.1 PREDICTED: similar to CsMA-1 isoform 2 C. intestinalis 99.2 376
XP_001507188.1 PREDICTED: actin, alpha skeletal muscle-like isoform 1 O. anatinus 98.7 376

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: kidney tumor [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: heart; kidney; embryonic tissue; eye; muscle; uncharacterized tissue; testis; prostate; larynx; lung; uterus; brain; mixed; intestine; liver; stomach; mouth; pancreas; vascular; umbilical cord; nerve; placenta; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 15
Map position: 15q14
UniSTS entry: Chr 15 SHGC-35611 [Map Viewer]
UniSTS entry: Chr 3 LOC345651
UniSTS entry: Chr 15 PMC23952P1
UniSTS entry: Chr 1 PMC133998P8
UniSTS entry: Chr 15 STS_ADH2
UniSTS entry: Chr 3 SHGC-77535 [Map Viewer]
UniSTS entry: PMC22515P2
UniSTS entry: Chr 15 PMC149351P1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AK129902.1 Homo sapiens cDNA FLJ26392 fis, clone HRT07595, highly similar to Actin, alpha cardiac P
AK129892.1 Homo sapiens cDNA FLJ26382 fis, clone HRT06756, highly similar to Actin, alpha cardiac P
NM_005159.4 Homo sapiens actin, alpha, cardiac muscle 1 (ACTC1), mRNA P
CR541795.1 Homo sapiens full open reading frame cDNA clone RZPDo834A0631D for gene ACTC, actin, alpha, cardiac muscle; complete cds, without stopcodon P
BC009978.2 Homo sapiens actin, alpha, cardiac muscle 1, mRNA (cDNA clone MGC:16637 IMAGE:4121697), complete cds PA
AK290616.1 Homo sapiens cDNA FLJ78096 complete cds, highly similar to Homo sapiens actin, alpha, cardiac muscle (ACTC), mRNA P

EST sequences (10 of 363) [Show all sequences]

AA954177.1 Clone IMAGE:1575048 kidney 3' read
AA954178.1 Clone IMAGE:1575050 kidney 3' read PA
AA955011.1 Clone IMAGE:1591253 kidney 3' read P
AA865401.1 Clone IMAGE:1459185 kidney 3' read PA
AA968481.1 Clone IMAGE:1574958 kidney 3' read PA
AA968570.1 Clone IMAGE:1592206 kidney 3' read A
AA970636.1 Clone IMAGE:1574489 kidney 3' read PA
AA976484.1 Clone IMAGE:1591795 kidney 3' read PA
AA977319.1 Clone IMAGE:1591849 kidney 3' read P
AA977452.1 Clone IMAGE:1591164 kidney 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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