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Splicing factor 3a, subunit 2, 66kDa (SF3A2)
Human protein-coding gene SF3A2. Represented by 375 ESTs from 136 cDNA libraries. Corresponds to reference sequence NM_007165.4. [UniGene 144640 - Hs.115232]
SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
| Best Hits and Hits from model organisms | Species | Id(%) | Len(aa) |
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PREDICTED: splicing factor 3A subunit 2 isoform 4 |
P. troglodytes |
100.0 |
463 |
|
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SF3A2 gene product |
H. sapiens |
100.0 |
463 |
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PREDICTED: splicing factor 3A subunit 2-like, partial |
O. anatinus |
99.5 |
204 |
|
|
Sf3a2 gene product |
M. musculus |
96.9 |
484 |
|
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sf3a2 gene product |
D. rerio |
95.3 |
277 |
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splicing factor 3a, subunit 2, 66kDa |
X. laevis |
90.1 |
404 |
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CG10754 |
D. melanogaster |
87.1 |
263 |
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Protein REPO-1 |
C. elegans |
82.4 |
221 |
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splicing factor 3A subunit 2 |
A. thaliana |
72.5 |
275 |
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splicing factor 3a, subunit 2 |
C. reinhardtii |
67.8 |
286 |
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hypothetical protein NCU07299 |
N. crassa |
64.9 |
245 |
| Other hits (2 of 56) [Show all] | Species | Id(%) | Len(aa) |
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PREDICTED: splicing factor 3A subunit 2-like |
S. scrofa |
99.0 |
203 |
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PREDICTED: LOW QUALITY PROTEIN: splicing factor 3A subunit 2 |
O. aries |
98.0 |
450 |
GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
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EST Profile: | Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this] |
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GEO Profiles: |
Experimental gene expression data (Gene Expression Omnibus). |
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cDNA Sources: |
brain; uncharacterized tissue; embryonic tissue; skin; eye; uterus; placenta; intestine; lymph; blood; bone; thymus; tonsil; mixed; muscle; lymph node; stomach; lung; testis; mammary gland; prostate; cervix; ovary; pancreas; adrenal gland; kidney; liver; spleen; nerve; thyroid; vascular; bone marrow; ganglia; ascites |
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
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Chromosome: |
19 |
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Map position: |
19p13.3 |
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UniSTS entry: |
Chr 1 |
GDB:182516 |
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SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.
mRNA sequences (5)
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NM_007165.4 |
Homo sapiens splicing factor 3a, subunit 2, 66kDa (SF3A2), mRNA |
PA |
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BC004434.1 |
Homo sapiens splicing factor 3a, subunit 2, 66kDa, mRNA (cDNA clone MGC:3975 IMAGE:2820900), complete cds |
PA |
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BC009903.2 |
Homo sapiens splicing factor 3a, subunit 2, 66kDa, mRNA (cDNA clone MGC:2362 IMAGE:2959124), complete cds |
PA |
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AK314815.1 |
Homo sapiens cDNA, FLJ95692, Homo sapiens splicing factor 3a, subunit 2, 66kDa (SF3A2), mRNA |
P |
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BC015804.1 |
Homo sapiens splicing factor 3a, subunit 2, 66kDa, mRNA (cDNA clone IMAGE:3906524), partial cds |
PA |
EST sequences (10 of 375) [Show all sequences]
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BX114140.1 |
Clone IMAGp998L061748_;_IMAGE:713621 |
ovary |
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A |
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AI280056.1 |
Clone IMAGE:1977006 |
brain |
3' read |
PA |
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AI348200.1 |
Clone IMAGE:1927139 |
intestine |
3' read |
P |
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AI357004.1 |
Clone IMAGE:2001417 |
lymph node |
3' read |
A |
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AI580259.1 |
Clone IMAGE:2215241 |
ovary |
3' read |
PA |
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AI702367.1 |
Clone IMAGE:2293559 |
pancreas |
3' read |
P |
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AI702383.1 |
Clone IMAGE:2293583 |
pancreas |
3' read |
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AI801472.1 |
Clone IMAGE:2185506 |
stomach |
3' read |
A |
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BX283381.1 |
Clone IMAGp958F041886_;_IMAGE:5424771 |
eye |
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P |
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AI833211.1 |
Clone IMAGE:2377906 |
intestine |
3' read |
PA |
Key to Symbols
P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria
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