> ARP6 actin-related protein 6 homolog (yeast) (ACTR6)
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UGID:144624     UniGene Hs.115088     Homo sapiens (human)   ACTR6 Order cDNA clone, Links
ARP6 actin-related protein 6 homolog (yeast) (ACTR6)

Human protein-coding gene ACTR6. Represented by 315 ESTs from 160 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 144624 - Hs.115088]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001088575.2 PREDICTED: actin-related protein 6 isoform 1 M. mulatta 100.0 426
XP_003907060.1 PREDICTED: actin-related protein 6 P. anubis 100.0 426
XP_003313932.1 PREDICTED: LOW QUALITY PROTEIN: actin-related protein 6 P. troglodytes 100.0 395
NP_071941.1 ACTR6 gene product H. sapiens 100.0 395
XP_852923.1 PREDICTED: actin-related protein 6 isoform 2 C. lupus familiaris 100.0 395
XP_001496222.1 PREDICTED: actin-related protein 6 E. caballus 100.0 395
XP_003355720.1 PREDICTED: actin-related protein 6 S. scrofa 100.0 395
NP_001092594.1 ACTR6 gene product B. taurus 99.8 395
XP_004006698.1 PREDICTED: actin-related protein 6 O. aries 99.8 395
XP_002711264.1 PREDICTED: ARP6 actin-related protein 6 homolog O. cuniculus 99.8 395
NP_080190.1 Actr6 gene product M. musculus 99.5 395
NP_001091370.1 ARP6 actin-related protein 6 homolog X. laevis 91.4 395
NP_955990.1 actr6 gene product D. rerio 86.4 395
NP_511165.1 Actin-related protein 6 D. melanogaster 50.5 386
NP_495681.4 Protein ARP-6 C. elegans 46.8 190
Other hits (2 of 33) [Show all]SpeciesId(%)Len(aa)
NP_001101551.1 Actr6 gene product R. norvegicus 99.5 395
XP_001521189.1 PREDICTED: actin-related protein 6-like, partial O. anatinus 99.0 102

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; placenta; testis; mixed; blood; embryonic tissue; pharynx; prostate; pancreas; kidney; cervix; uncharacterized tissue; lung; intestine; stomach; muscle; uterus; adipose tissue; eye; salivary gland; esophagus; bladder; mammary gland; heart; bone marrow; bone; pituitary gland; skin; adrenal gland; thymus; amniotic fluid; mouth; ascites; liver; vascular; ear; lymph node; larynx; connective tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12q23.1
UniSTS entry: Chr 12 D12S2127 [Map Viewer]
UniSTS entry: Chr 12 D12S1588 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

BC042997.1 Homo sapiens cDNA clone IMAGE:5296841, containing frame-shift errors PA
BC050679.1 Homo sapiens ARP6 actin-related protein 6 homolog (yeast), mRNA (cDNA clone IMAGE:3923638), with apparent retained intron PA
AF175226.1 Homo sapiens tissue-type aorta MSTP136 mRNA, complete cds PA
AK124075.1 Homo sapiens cDNA FLJ42081 fis, clone TBAES2000004, highly similar to Actin-related protein 6 P
AK222959.1 Homo sapiens mRNA for ARP6 actin-related protein 6 homolog, clone: HSI01295 P
AK023495.1 Homo sapiens cDNA FLJ13433 fis, clone PLACE1002571, weakly similar to ACTIN-LIKE PROTEIN 13E P
AK023684.1 Homo sapiens cDNA FLJ13622 fis, clone PLACE1010960, weakly similar to ACTIN-LIKE PROTEIN 13E P
NM_022496.4 Homo sapiens ARP6 actin-related protein 6 homolog (yeast) (ACTR6), transcript variant 1, mRNA PA
AB038229.1 Homo sapiens mRNA for hARPX, complete cds PA
AF212251.1 Homo sapiens CDA12 mRNA, complete cds PA
BC015107.1 Homo sapiens ARP6 actin-related protein 6 homolog (yeast), mRNA (cDNA clone MGC:22861 IMAGE:3996449), complete cds PA
AF161399.1 Homo sapiens HSPC281 mRNA, partial cds P
NR_048569.1 Homo sapiens ARP6 actin-related protein 6 homolog (yeast) (ACTR6), transcript variant 3, non-coding RNA PA
NR_048568.1 Homo sapiens ARP6 actin-related protein 6 homolog (yeast) (ACTR6), transcript variant 2, non-coding RNA PA

EST sequences (10 of 315) [Show all sequences]

AA973615.1 Clone IMAGE:1569343 lung 3' read A
R16482.1 Clone IMAGE:128623 mixed 5' read
R21742.1 Clone IMAGE:130394 placenta 3' read A
R21787.1 Clone IMAGE:130394 placenta 5' read P
BX099955.1 Clone IMAGp998G096074_;_IMAGE:2443040 uterus A
BX103169.1 Clone IMAGp998P11419_;_IMAGE:213754 mixed
AI167234.1 Clone IMAGE:1565614 mixed 3' read A
R25958.1 Clone IMAGE:132588 placenta 5' read
R26764.1 Clone IMAGE:132588 placenta 3' read
CB107189.1 Clone L3SNU475-14-E01 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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