> AAR2 splicing factor homolog (S. cerevisiae) (AAR2)
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UGID:132747     UniGene Hs.11314     Homo sapiens (human)   AAR2 Order cDNA clone, Links
AAR2 splicing factor homolog (S. cerevisiae) (AAR2)

Human protein-coding gene AAR2. Represented by 292 ESTs from 143 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 132747 - Hs.11314]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001166196.1 PREDICTED: protein AAR2 homolog isoform 4 P. troglodytes 100.0 383
NP_056326.2 AAR2 gene product H. sapiens 100.0 383
NP_001158290.1 Aar2 gene product M. musculus 93.2 382
NP_001002221.1 aar2 gene product D. rerio 68.5 381
NP_001086685.2 AAR2 splicing factor homolog X. laevis 63.8 378
Other hits (2 of 25) [Show all]SpeciesId(%)Len(aa)
XP_003904847.1 PREDICTED: uncharacterized protein C20orf4 homolog isoform 1 P. anubis 99.0 383
XP_001096413.2 PREDICTED: uncharacterized protein C20orf4 homolog isoform 1 M. mulatta 97.9 378

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; brain; skin; testis; lung; mixed; embryonic tissue; eye; placenta; pancreas; intestine; cervix; uterus; liver; pharynx; pituitary gland; prostate; lymph; muscle; blood; kidney; mammary gland; ovary; adrenal gland; ascites; connective tissue; bone; epididymis; lymph node; heart; bladder; parathyroid; esophagus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 20
Map position: 20pter-q12
UniSTS entry: Chr 20 SHGC-64252
UniSTS entry: Chr 20 RH80496
UniSTS entry: Chr 20 SHGC-142131
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AL117419.1 Homo sapiens mRNA; cDNA DKFZp564N1363 (from clone DKFZp564N1363) PA
NM_015511.4 Homo sapiens AAR2 splicing factor homolog (S. cerevisiae) (AAR2), transcript variant 1, mRNA PA
AF132957.1 Homo sapiens CGI-23 protein mRNA, complete cds P
BC001751.1 Homo sapiens chromosome 20 open reading frame 4, mRNA (cDNA clone MGC:1227 IMAGE:3536406), complete cds PA
BC019311.1 Homo sapiens chromosome 20 open reading frame 4, mRNA (cDNA clone MGC:4208 IMAGE:2905315), complete cds PA
AF113672.1 Homo sapiens clone FLB1120 PRO0225 mRNA, complete cds PA
NM_001271874.1 Homo sapiens AAR2 splicing factor homolog (S. cerevisiae) (AAR2), transcript variant 2, mRNA A

EST sequences (10 of 292) [Show all sequences]

AA973258.1 Clone IMAGE:1536821 kidney 3' read A
AA974149.1 Clone IMAGE:1585877 uncharacterized tissue 3' read A
AI027514.1 Clone IMAGE:1650422 parathyroid 3' read A
AI057113.1 Clone IMAGE:1676222 embryonic tissue 3' read A
AA862551.1 Clone IMAGE:1469459 uncharacterized tissue 3' read A
AI191315.1 Clone IMAGE:1742216 lung 3' read A
AI262673.1 Clone IMAGE:1870936 intestine 3' read A
CB115897.1 Clone L8SCK0-10-G07 liver 5' read
CB115898.1 Clone L8SCK0-10-G11 liver 5' read
AI285174.1 Clone IMAGE:1874333 intestine 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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