> S100 calcium binding protein A9 (S100A9)
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UGID:144189     UniGene Hs.112405     Homo sapiens (human)   S100A9 Order cDNA clone, Links
S100 calcium binding protein A9 (S100A9)

Human protein-coding gene S100A9. Represented by 364 ESTs from 125 cDNA libraries. Corresponds to reference sequence NM_002965.3. [UniGene 144189 - Hs.112405]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_002956.1 S100A9 gene product H. sapiens 100.0 113
Other hits (2 of 8) [Show all]SpeciesId(%)Len(aa)
XP_003308531.1 PREDICTED: protein S100-A9 P. troglodytes 99.1 113
XP_003892706.1 PREDICTED: protein S100-A9 P. anubis 90.3 113

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: bone marrow; lung; uterus; mouth; blood; larynx; mixed; eye; mammary gland; uncharacterized tissue; spleen; pharynx; brain; pancreas; esophagus; heart; cervix; adipose tissue; vascular; muscle; kidney; umbilical cord; intestine; embryonic tissue; skin; liver; bone; placenta; thymus; prostate; stomach
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q21
UniSTS entry: Chr 1 D1S3414 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

BC047681.2 Homo sapiens S100 calcium binding protein A9, mRNA (cDNA clone MGC:51841 IMAGE:6060124), complete cds PA
NM_002965.3 Homo sapiens S100 calcium binding protein A9 (S100A9), mRNA P
CR542224.1 Homo sapiens full open reading frame cDNA clone RZPDo834A1125D for gene S100A9, S100 calcium binding protein A9 (calgranulin B); complete cds, without stopcodon P
CR542207.1 Homo sapiens full open reading frame cDNA clone RZPDo834C0125D for gene S100A9, S100 calcium binding protein A9 (calgranulin B); complete cds, incl. stopcodon P
AK311882.1 Homo sapiens cDNA, FLJ92148, highly similar to Homo sapiens S100 calcium binding protein A9 (calgranulin B) (S100A9), mRNA P
AF086362.1 Homo sapiens full length insert cDNA clone ZD66A09 PA
X06233.1 Human mRNA for calcium-binding protein in macrophages (MRP-14) macrophage migration inhibitory factor (MIF)-related protein P
M26311.1 Human cystic fibrosis antigen mRNA, complete cds P

EST sequences (10 of 364) [Show all sequences]

AA864554.1 Clone IMAGE:1459376 kidney 3' read
AA989720.1 Clone IMAGE:1577440 spleen 3' read
AI128515.1 Clone IMAGE:1714136 placenta 3' read PA
CB051911.1 Clone IMAGE:3289797 uncharacterized tissue 5' read A
AI219142.1 Clone IMAGE:1759331 placenta 3' read A
CB150471.1 Clone C1SNU17-30-F07 cervix 5' read PA
CB150659.1 Clone C1SNU17-32-G02 cervix 5' read P
CB151783.1 Clone C1SNU17-42-F03 cervix 5' read P
AI281728.1 Clone IMAGE:1960897 esophagus 3' read PA
AI312169.1 Clone IMAGE:2050291 bone marrow 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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