> PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) (PIF1)
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UGID:144162     UniGene Hs.112160     Homo sapiens (human)   PIF1 Order cDNA clone, Links
PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) (PIF1)

Human protein-coding gene PIF1. Represented by 67 ESTs from 40 cDNA libraries. Corresponds to reference sequence NM_025049.2. [UniGene 144162 - Hs.112160]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_079325.2 PIF1 gene product H. sapiens 100.0 640
XP_510475.2 PREDICTED: ATP-dependent DNA helicase PIF1 isoform 2 P. troglodytes 99.9 706
NP_766041.1 Pif1 gene product M. musculus 88.8 642
NP_001089530.1 ATP-dependent DNA helicase PIF1 X. laevis 67.0 619
NP_942102.1 pif1 gene product D. rerio 66.4 634
NP_608782.1 CG3238 D. melanogaster 50.6 618
NP_490774.2 Protein PIF-1 C. elegans 48.4 401
Other hits (2 of 35) [Show all]SpeciesId(%)Len(aa)
XP_003901104.1 PREDICTED: ATP-dependent DNA helicase PIF1 isoform 1 P. anubis 97.2 640
XP_001108233.1 PREDICTED: ATP-dependent DNA helicase PIF1-like isoform 2 M. mulatta 97.0 640

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; uncharacterized tissue; mixed; uterus; intestine; ovary; vascular; brain; liver; lung; mouth; skin; prostate; kidney; heart; eye; lymph; epididymis; spleen; lymph node; mammary gland; placenta; cervix; blood
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 15
Map position: 15q22.31
UniSTS entry: Chr 15 D15S1318
UniSTS entry: Chr 15 D15S1318 [Map Viewer]
UniSTS entry: Chr 15 MARC_21552-21553:1044288241:1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

AF108138.1 Homo sapiens DNA helicase homolog (PIF1) mRNA, partial cds PA
AK026345.1 Homo sapiens cDNA: FLJ22692 fis, clone HSI11184 PA
AB185927.1 Homo sapiens PIF1 mRNA for PIF1 DNA helicase isoform beta, complete cds P
AB185926.1 Homo sapiens PIF1 mRNA for PIF1 DNA helicase isoform alpha, complete cds P
AY498716.1 Homo sapiens PIF1/RRM3 DNA helicase-like protein (PIF1) mRNA, complete cds P
DQ437529.1 Homo sapiens DNA helicase PIF1 (PIF1) mRNA, complete cds P
NM_025049.2 Homo sapiens PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) (PIF1), mRNA P
BC018978.2 Homo sapiens chromosome 15 open reading frame 20, mRNA (cDNA clone IMAGE:3139288), partial cds PA
BC137504.1 Homo sapiens PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae), mRNA (cDNA clone MGC:169127 IMAGE:9021504), complete cds P
EU084033.1 Homo sapiens PIF1 DNA helicase transcript variant 1 (PIF1) mRNA, complete cds PA
BC137503.1 Homo sapiens PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae), mRNA (cDNA clone MGC:169126 IMAGE:9021503), complete cds P
BC033254.1 Homo sapiens chromosome 15 open reading frame 20, mRNA (cDNA clone IMAGE:5445559) PA

EST sequences (10 of 67) [Show all sequences]

AA973831.1 Clone IMAGE:1586050 uncharacterized tissue 3' read
BX109827.1 Clone IMAGp998E1783_;_IMAGE:109816 mixed A
AI280491.1 Clone IMAGE:1963661 ovary 3' read PA
AI333976.1 Clone IMAGE:1934243 mixed 3' read PA
AI652391.1 Clone IMAGE:2306254 uncharacterized tissue 3' read PA
AI654749.1 Clone IMAGE:2216412 ovary 3' read PA
AI655645.1 Clone IMAGE:2239444 uncharacterized tissue 3' read PA
AI696210.1 Clone IMAGE:2240852 uncharacterized tissue 3' read PA
AI745642.1 Clone IMAGE:2219215 ovary 3' read PA
BX283578.1 Clone IMAGp958I17105_;_IMAGE:3139288 placenta P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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