> PMS1 postmeiotic segregation increased 1 (S. cerevisiae) (PMS1)
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UGID:144118     UniGene Hs.111749     Homo sapiens (human)   PMS1 Links
PMS1 postmeiotic segregation increased 1 (S. cerevisiae) (PMS1)

Human protein-coding gene PMS1. Represented by 328 ESTs from 157 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 144118 - Hs.111749]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_515987.3 PREDICTED: PMS1 protein homolog 1 isoform 3 P. troglodytes 100.0 931
NP_000525.1 PMS1 gene product H. sapiens 100.0 931
NP_705784.1 PMS1 protein homolog 1 M. musculus 83.1 916
NP_001079545.1 postmeiotic segregation increased 1 X. laevis 61.8 921
NP_958476.2 PMS1 protein homolog 1 D. rerio 56.6 884
Other hits (2 of 27) [Show all]SpeciesId(%)Len(aa)
XP_003907775.1 PREDICTED: PMS1 protein homolog 1 isoform 1 P. anubis 98.0 930
XP_001103074.2 PREDICTED: PMS1 protein homolog 1 M. mulatta 97.9 769

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; lung; connective tissue; uncharacterized tissue; pituitary gland; kidney; liver; bone marrow; embryonic tissue; lymph node; bladder; blood; intestine; heart; adipose tissue; thymus; uterus; mixed; eye; skin; mouth; trachea; prostate; muscle; pancreas; stomach; ascites; bone; placenta; ovary; mammary gland; salivary gland; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2q31.1
UniSTS entry: Chr 2 GDB:581629
UniSTS entry: Chr 2 SGC38239 [Map Viewer]
UniSTS entry: Chr 2 RH93649
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (25)

BT006947.1 Homo sapiens PMS1 postmeiotic segregation increased 1 (S. cerevisiae) mRNA, complete cds P
NM_000534.4 Homo sapiens PMS1 postmeiotic segregation increased 1 (S. cerevisiae) (PMS1), transcript variant 1, mRNA PA
BC066989.1 Homo sapiens cDNA clone IMAGE:5267335 A
BC084548.1 Homo sapiens PMS1 postmeiotic segregation increased 1 (S. cerevisiae), mRNA (cDNA clone IMAGE:5443855), complete cds PA
AB102877.1 Homo sapiens mRNA for PMS1 nirs variant 9, complete cds P
AB102876.1 Homo sapiens mRNA for PMS1 nirs variant 8, complete cds P
AB102875.1 Homo sapiens mRNA for PMS1 nirs variant 7, complete cds P
AB102874.1 Homo sapiens mRNA for PMS1 nirs variant 6, complete cds P
AB102873.1 Homo sapiens mRNA for PMS1 nirs variant 5, complete cds P
AB102872.1 Homo sapiens mRNA for PMS1 nirs variant 4, complete cds P
AB102871.1 Homo sapiens mRNA for PMS1 nirs variant 3, complete cds
AB102870.1 Homo sapiens mRNA for PMS1 nirs variant 2, complete cds P
AB102869.1 Homo sapiens mRNA for PMS1 nirs variant 1, complete cds P
BC096330.1 Homo sapiens PMS1 postmeiotic segregation increased 1 (S. cerevisiae), mRNA (cDNA clone IMAGE:40008289), partial cds P
BC096332.1 Homo sapiens PMS1 postmeiotic segregation increased 1 (S. cerevisiae), mRNA (cDNA clone IMAGE:40008291), partial cds P
BC008410.1 Homo sapiens PMS1 postmeiotic segregation increased 1 (S. cerevisiae), mRNA (cDNA clone IMAGE:4097623), containing frame-shift errors PA
EF491797.1 Homo sapiens clone PMS1 mRNA, partial sequence; alternatively spliced
AK308311.1 Homo sapiens cDNA, FLJ98259 P
NM_001128144.1 Homo sapiens PMS1 postmeiotic segregation increased 1 (S. cerevisiae) (PMS1), transcript variant 3, mRNA PA
NM_001128143.1 Homo sapiens PMS1 postmeiotic segregation increased 1 (S. cerevisiae) (PMS1), transcript variant 2, mRNA PA
AK304634.1 Homo sapiens cDNA FLJ51198 partial cds, highly similar to PMS1 protein homolog 1 P
AK297440.1 Homo sapiens cDNA FLJ59348 complete cds, highly similar to PMS1 protein homolog 1 P
AK295602.1 Homo sapiens cDNA FLJ50966 complete cds, highly similar to PMS1 protein homolog 1 PA
BC036376.1 Homo sapiens PMS1 postmeiotic segregation increased 1 (S. cerevisiae), mRNA (cDNA clone IMAGE:4822417) P
AK316215.1 Homo sapiens cDNA, FLJ79114 complete cds, highly similar to PMS1 protein homolog 1 P

EST sequences (10 of 328) [Show all sequences]

AA953633.1 Clone IMAGE:1591199 kidney 3' read A
AA862512.1 Clone IMAGE:1456997 kidney 3' read A
AA908182.1 Clone IMAGE:1522558 lung 3' read
AA908256.1 Clone IMAGE:1522619 lung 3' read
AI076038.1 Clone IMAGE:1670208 brain 3' read PA
BX117693.1 Clone IMAGp998K072040_;_IMAGE:825726 lymph node P
AI216063.1 Clone IMAGE:1883751 lung 3' read
CB144057.1 Clone L16HLK3-23-H09 liver 5' read P
CB157373.1 Clone L17N670205n1-3-G04 liver 5' read P
CB161021.1 Clone L18POOL1n1-24-F09 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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