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UGID:144112     UniGene Hs.111632     Homo sapiens (human)   LSM3 Order cDNA clone, Links
LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) (LSM3)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_080585.1 LSM3 homolog, U6 small nuclear RNA associated M. musculus 100.0 101
NP_001100081.1 LSM3 homolog, U6 small nuclear RNA associated R. norvegicus 100.0 101
XP_001366562.1 PREDICTED: similar to breast cancer-associated antigen BRCAA1 isoform 1 M. domestica 100.0 101
XP_002198707.1 PREDICTED: putative sm like protein U6 snRNA-associated Sm-like protein T. guttata 100.0 101
XP_414380.1 PREDICTED: similar to Lsm3 protein G. gallus 100.0 101
XP_001506609.1 PREDICTED: similar to Lsm3 protein O. anatinus 100.0 101
XP_001092186.1 PREDICTED: LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) M. mulatta 100.0 101
NP_055278.1 Lsm3 protein H. sapiens 100.0 101
XP_849275.1 PREDICTED: similar to LSM3 homolog, U6 small nuclear RNA associated isoform 1 C. lupus familiaris 100.0 101
NP_001032564.1 LSM3 homolog, U6 small nuclear RNA associated B. taurus 100.0 101
NP_001091408.1 hypothetical protein LOC100049097 X. laevis 99.0 101
NP_177812.1 small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative A. thaliana 85.7 90
XP_001697878.1 Sm protein C. reinhardtii 84.5 96
NP_732931.1 CG31184 D. melanogaster 84.5 102
NP_502579.1 LSM Sm-like protein family member (lsm-3) C. elegans 78.2 101

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; pharynx; stomach; bone; testis; prostate; ovary; umbilical cord; cervix; skin; salivary gland; connective tissue; bladder; heart; mixed; embryonic tissue; mammary gland; pituitary gland; pancreas; ear; uterus; intestine; eye; blood; esophagus; liver; kidney; parathyroid; uncharacterized tissue; muscle; mouth; bone marrow; placenta; vascular; adrenal gland; lymph; ascites; lymph node; pineal gland; nerve
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3p25.1
UniSTS entry: Chr 11 (n/a)
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AJ238095.1 Homo sapiens mRNA for Lsm3 protein PA
CR457185.1 Homo sapiens full open reading frame cDNA clone RZPDo834D118D for gene LSM3, LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae); complete cds, incl. stopcodon P
NM_014463.1 Homo sapiens LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) (LSM3), mRNA PA
AF182289.1 Homo sapiens U6 snRNA-associated Sm-like protein LSm3 mRNA, complete cds PA
AF182418.1 Homo sapiens MDS017 (MDS017) mRNA, complete cds PA
BC007055.1 Homo sapiens LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae), mRNA (cDNA clone MGC:12477 IMAGE:3828636), complete cds PA
AK312189.1 Homo sapiens cDNA, FLJ92476, highly similar to Homo sapiens LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) (LSM3), mRNA P

EST sequences (10 of 329) [Show all sequences]

AA903592.1 Clone IMAGE:1517540 uncharacterized tissue 3' read PA
AI092858.1 Clone IMAGE:1692745 heart 3' read PA
AI125258.1 Clone IMAGE:1736904 testis 3' read PA
AI126789.1 Clone IMAGE:1707781 heart 3' read PA
AI127199.1 Clone IMAGE:1708227 heart 3' read A
AI140807.1 Clone IMAGE:1566235 mixed 3' read PA
AI083956.1 Clone IMAGE:1679037 skin 3' read PA
AI086749.1 Clone IMAGE:1680972 skin 3' read PA
AI161269.1 Clone IMAGE:1703483 brain 3' read PA
BX096371.1 Clone IMAGp998J2389_;_IMAGE:112246 mixed PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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