> Integral membrane protein 2C (ITM2C)
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UGID:144109     UniGene Hs.111577     Homo sapiens (human)   ITM2C Order cDNA clone, Links
Integral membrane protein 2C (ITM2C)

Human protein-coding gene ITM2C. Represented by 1930 ESTs from 379 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 144109 - Hs.111577]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003908102.1 PREDICTED: integral membrane protein 2C isoform 1 P. anubis 100.0 266
XP_003309555.1 PREDICTED: integral membrane protein 2C isoform 1 P. troglodytes 100.0 266
NP_112188.1 ITM2C gene product H. sapiens 100.0 266
XP_001112946.2 PREDICTED: integral membrane protein 2C isoform 5 M. mulatta 99.7 305
NP_071862.2 Itm2c gene product M. musculus 99.6 268
NP_001002549.1 itm2ca gene product D. rerio 72.7 259
NP_001080382.1 integral membrane protein 2B X. laevis 57.0 207
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
NP_001009674.1 Itm2c gene product R. norvegicus 99.3 268
NP_001116603.1 ITM2C gene product S. scrofa 98.5 268

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; intestine; embryonic tissue; kidney; placenta; uncharacterized tissue; testis; thymus; prostate; uterus; stomach; lung; eye; skin; mixed; parathyroid; bone marrow; nerve; spleen; lymph node; connective tissue; heart; ovary; adipose tissue; pancreas; umbilical cord; thyroid; muscle; pituitary gland; bone; cervix; amniotic fluid; mammary gland; blood; liver; bladder; trachea; esophagus; vascular; mouth; tonsil; ascites; salivary gland; adrenal gland; lymph; ear; ganglia; pharynx; larynx; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2q37
UniSTS entry: Chr 2 RH102262
UniSTS entry: Chr 2 D2S1689E
UniSTS entry: Chr 2 D2S186E
UniSTS entry: Chr 2 D2S232E
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (22)

BC050668.1 Homo sapiens integral membrane protein 2C, mRNA (cDNA clone MGC:60191 IMAGE:5759920), complete cds PA
CR457208.1 Homo sapiens full open reading frame cDNA clone RZPDo834H0212D for gene ITM2C, integral membrane protein 2C; complete cds, incl. stopcodon P
AF272043.1 Homo sapiens BRI3 mRNA, complete cds P
NM_001012516.1 Homo sapiens integral membrane protein 2C (ITM2C), transcript variant 2, mRNA PA
NM_001012514.1 Homo sapiens integral membrane protein 2C (ITM2C), transcript variant 3, mRNA PA
AK222697.1 Homo sapiens mRNA for integral membrane protein 3 variant, clone: CBR05009 P
BC098563.1 Homo sapiens integral membrane protein 2C, mRNA (cDNA clone MGC:111364 IMAGE:30558635), complete cds PA
BC002424.1 Homo sapiens integral membrane protein 2C, mRNA (cDNA clone MGC:3011 IMAGE:3162430), complete cds PA
AF271781.1 Homo sapiens NPD018 mRNA, complete cds PA
AL136603.1 Homo sapiens mRNA; cDNA DKFZp564L1216 (from clone DKFZp564L1216) PA
NM_030926.4 Homo sapiens integral membrane protein 2C (ITM2C), transcript variant 1, mRNA PA
AB003629.1 Homo sapiens hucep-14 mRNA for cerebral protein-14, complete cds P
D87062.1 Homo sapiens hucep-3 mRNA for cerebral protein-3, complete cds
AY049777.1 Homo sapiens BRI3 mRNA, complete cds P
AK056321.1 Homo sapiens cDNA FLJ31759 fis, clone NT2RI2007723, highly similar to Homo sapiens integral membrane protein 2C (ITM2C), transcript variant 3, mRNA P
AK307702.1 Homo sapiens cDNA, FLJ97650 P
BC025742.1 Homo sapiens integral membrane protein 2C, mRNA (cDNA clone MGC:34128 IMAGE:5224043), complete cds PA
AL713651.1 Homo sapiens mRNA; cDNA DKFZp586H032 (from clone DKFZp586H032) PA
AK090975.1 Homo sapiens cDNA FLJ33656 fis, clone BRAMY2025175, highly similar to Homo sapiens BRI3 mRNA P
AK303199.1 Homo sapiens cDNA FLJ54212 complete cds, highly similar to Integral membrane protein 2C P
AK295503.1 Homo sapiens cDNA FLJ55065 complete cds, highly similar to Integral membrane protein 2C P
AK075361.1 Homo sapiens cDNA PSEC0047 fis, clone NT2RP1001042, highly similar to Integral membrane protein 2C P

EST sequences (10 of 1930) [Show all sequences]

AA968846.1 Clone IMAGE:1575041 kidney 3' read A
AA968956.1 Clone IMAGE:1574636 kidney 3' read A
AA985532.1 Clone IMAGE:1592965 kidney 3' read A
AA985619.1 Clone IMAGE:1593037 kidney 3' read A
AA989167.1 Clone IMAGE:1594060 kidney 3' read A
AI076504.1 Clone IMAGE:1676663 embryonic tissue 3' read A
AI077778.1 Clone IMAGE:1667792 parathyroid 3' read A
AI091765.1 Clone IMAGE:1694124 heart 3' read A
AI127044.1 Clone IMAGE:1708036 heart 3' read A
AI130773.1 Clone IMAGE:1709421 heart 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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