> Solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1 (SLC25A1)
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UGID:144068     UniGene Hs.111024     Homo sapiens (human)   SLC25A1 Order cDNA clone, Links
Solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1 (SLC25A1)

Human protein-coding gene SLC25A1. Represented by 636 ESTs from 231 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 144068 - Hs.111024]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001243463.1 SLC25A1 gene product H. sapiens 100.0 317
XP_001112697.2 PREDICTED: tricarboxylate transport protein, mitochondrial M. mulatta 100.0 310
XP_001165281.1 PREDICTED: tricarboxylate transport protein, mitochondrial isoform 2 P. troglodytes 100.0 310
XP_003905260.1 PREDICTED: tricarboxylate transport protein, mitochondrial P. anubis 99.7 310
NP_694790.1 Slc25a1 gene product M. musculus 96.8 310
NP_001092179.2 solute carrier family 25, member 1 X. laevis 89.2 332
XP_003199324.1 PREDICTED: tricarboxylate transport protein, mitochondrial D. rerio 88.6 315
NP_001027175.1 scheggia, isoform E D. melanogaster 71.0 293
NP_499187.1 Protein K11H3.3 C. elegans 67.0 303
Other hits (2 of 37) [Show all]SpeciesId(%)Len(aa)
XP_850441.2 PREDICTED: tricarboxylate transport protein, mitochondrial C. lupus familiaris 99.3 305
XP_001488619.2 PREDICTED: tricarboxylate transport protein, mitochondrial-like E. caballus 99.0 286

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; pancreas; uncharacterized tissue; uterus; embryonic tissue; mammary gland; placenta; mixed; ascites; eye; intestine; muscle; cervix; larynx; skin; liver; lung; bladder; adipose tissue; kidney; salivary gland; prostate; ovary; tonsil; bone; heart; blood; lymph node; thymus; bone marrow; thyroid; esophagus; spleen; lymph; connective tissue; nerve; adrenal gland; pharynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 22
Map position: 22q11.21
UniSTS entry: Chr 11 SGC31622 [Map Viewer]
UniSTS entry: Chr 22 G19115
UniSTS entry: Chr 22 D22S1571
UniSTS entry: Chr 22 D22S1621
UniSTS entry: Es2el
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

U25147.1 Human citrate transporter protein mRNA, nuclear gene encoding mitochondrial protein, complete cds P
BC004980.1 Homo sapiens solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1, mRNA (cDNA clone MGC:3876 IMAGE:2957917), complete cds PA
BC008061.2 Homo sapiens solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1, mRNA (cDNA clone MGC:2151 IMAGE:2958945), complete cds PA
L75823.1 Homo sapiens citrate transport protein mRNA, complete cds; nuclear gene for mitochondrial product P
AK292313.1 Homo sapiens cDNA FLJ75289 complete cds, highly similar to Homo sapiens solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1 (SLC25A1), mRNA P
NM_005984.3 Homo sapiens solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1 (SLC25A1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA PA
AK298204.1 Homo sapiens cDNA FLJ60026 complete cds, highly similar to Tricarboxylate transport protein, mitochondrial precursor P
BC018590.1 Homo sapiens solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1, mRNA (cDNA clone IMAGE:3868835) PA
L77567.1 Homo sapiens mitochondrial citrate transport protein (CTP) mRNA, 3' end P
HM037273.1 Homo sapiens plasma membrane citrate carrier (SLC25A1) mRNA, complete cds P
NM_001256534.1 Homo sapiens solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1 (SLC25A1), transcript variant 3, mRNA PA
NR_033687.2 Homo sapiens solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1 (SLC25A1), transcript variant 2, non-coding RNA PA
NR_046298.1 Homo sapiens solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1 (SLC25A1), transcript variant 4, non-coding RNA PA

EST sequences (10 of 636) [Show all sequences]

AA961912.1 Clone IMAGE:1579831 mixed 3' read A
AA906165.1 Clone IMAGE:1506322 mixed 3' read P
AI015640.1 Clone IMAGE:1635536 kidney 3' read P
AI032433.1 Clone IMAGE:1631346 mammary gland 3' read A
AI091222.1 Clone IMAGE:1566925 mixed 3' read A
R26147.1 Clone IMAGE:133111 placenta 3' read A
R26361.1 Clone IMAGE:133111 placenta 5' read
AI202181.1 Clone IMAGE:1943342 prostate 3' read A
AI249441.1 Clone IMAGE:2000189 lymph node 3' read P
CB155991.1 Clone L17N670205n1-2-B09 liver 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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