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UGID:144015     UniGene Hs.110298     Homo sapiens (human)   ACBD4
Acyl-CoA binding domain containing 4 (ACBD4)

Human protein-coding gene ACBD4. Represented by 145 ESTs from 99 cDNA libraries. Corresponds to 5 reference sequences (different isoforms). [UniGene 144015 - Hs.110298]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001129176.1 ACBD4 gene product H. sapiens 100.0 340
NP_080264.1 acyl-Coenzyme A binding domain containing 4 isoform 1 M. musculus 85.4 328
NP_998260.1 acbd4 gene product D. rerio 64.5 197
NP_001087866.1 acyl-CoA-binding domain-containing protein 5 X. laevis 57.8 142
Other hits (2 of 18) [Show all]SpeciesId(%)Len(aa)
XP_001142437.1 PREDICTED: acyl-CoA-binding domain-containing protein 4 isoform 3 P. troglodytes 99.0 304
XP_003913244.1 PREDICTED: acyl-CoA-binding domain-containing protein 4 P. anubis 98.0 301

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; uncharacterized tissue; prostate; mammary gland; embryonic tissue; kidney; ovary; thymus; heart; testis; eye; intestine; placenta; pancreas; uterus; salivary gland; adipose tissue; muscle; skin; bladder; connective tissue; liver; adrenal gland; stomach; blood; lung; thyroid; ganglia; lymph node; cervix
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q21.31
UniSTS entry: Chr 17 RH98888
UniSTS entry: Chr 1 G35510
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

AB073387.1 Homo sapiens hepatoblastoma cDNA, clone:HMFT0700, full insert sequence PA
AK023384.1 Homo sapiens cDNA FLJ13322 fis, clone OVARC1001713, weakly similar to ENDOZEPINE-RELATED PROTEIN PRECURSOR P
NM_024722.2 Homo sapiens acyl-CoA binding domain containing 4 (ACBD4), transcript variant 2, mRNA PA
BC029164.1 Homo sapiens acyl-Coenzyme A binding domain containing 4, mRNA (cDNA clone MGC:35411 IMAGE:5188183), complete cds PA
AK296167.1 Homo sapiens cDNA FLJ50016 complete cds, highly similar to Acyl-CoA-binding domain-containing protein 4 P
NM_001135706.1 Homo sapiens acyl-CoA binding domain containing 4 (ACBD4), transcript variant 3, mRNA PA
NM_001135705.1 Homo sapiens acyl-CoA binding domain containing 4 (ACBD4), transcript variant 4, mRNA PA
NM_001135704.1 Homo sapiens acyl-CoA binding domain containing 4 (ACBD4), transcript variant 1, mRNA PA
NM_001135707.1 Homo sapiens acyl-CoA binding domain containing 4 (ACBD4), transcript variant 5, mRNA P
AK075104.1 Homo sapiens cDNA FLJ90623 fis, clone PLACE1002905, weakly similar to ENDOZEPINE-RELATED PROTEIN PRECURSOR P
BC022000.1 Homo sapiens acyl-Coenzyme A binding domain containing 4, mRNA (cDNA clone IMAGE:4820361), with apparent retained intron PA
AK316359.1 Homo sapiens cDNA, FLJ79258 complete cds, highly similar to Acyl-CoA-binding domain-containing protein 4 P
BC041143.1 Homo sapiens acyl-Coenzyme A binding domain containing 4, mRNA (cDNA clone MGC:47581 IMAGE:5769682), complete cds PA

EST sequences (10 of 145) [Show all sequences]

AA974739.1 Clone IMAGE:1578305 mixed 3' read A
AI090955.1 Clone IMAGE:1690394 mixed 3' read A
AI205288.1 Clone IMAGE:1952909 brain 3' read
AI272247.1 Clone IMAGE:1956128 brain 3' read
AI523921.1 Clone IMAGE:2116781 uncharacterized tissue 3' read A
F29152.1 Clone s4000072H12 muscle
AI682700.1 Clone IMAGE:2323480 pancreas 3' read A
AI690983.1 Clone IMAGE:2208662 uterus 3' read A
CB265674.1 adipose tissue 5' read P
AI857257.1 Clone IMAGE:2428760 brain 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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