> Tripartite motif containing 35 (TRIM35)
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UGID:143277     UniGene Hs.104223     Homo sapiens (human)   TRIM35 Order cDNA clone, Links
Tripartite motif containing 35 (TRIM35)

Human protein-coding gene TRIM35. Represented by 88 ESTs from 65 cDNA libraries. Corresponds to reference sequence NM_171982.3. [UniGene 143277 - Hs.104223]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001108814.1 PREDICTED: tripartite motif-containing protein 35-like M. mulatta 100.0 492
XP_003902627.1 PREDICTED: tripartite motif-containing protein 35 P. anubis 100.0 492
XP_519674.2 PREDICTED: tripartite motif-containing protein 35 P. troglodytes 100.0 492
NP_741983.2 TRIM35 gene product H. sapiens 100.0 492
NP_084255.2 Trim35 gene product M. musculus 83.1 504
Other hits (2 of 12) [Show all]SpeciesId(%)Len(aa)
XP_002709353.1 PREDICTED: tripartite motif-containing 35 O. cuniculus 94.8 516
XP_001915220.1 PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein 35-like, partial E. caballus 92.9 452

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; uterus; lung; uncharacterized tissue; pancreas; kidney; eye; skin; placenta; thyroid; parathyroid; connective tissue; muscle; embryonic tissue; intestine; thymus; tonsil; lymph; ovary; adipose tissue; salivary gland; testis; liver; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 8
Map position: 8p21.2
UniSTS entry: Chr 8 RH67896
UniSTS entry: Chr 8 RH46973 [Map Viewer]
UniSTS entry: Chr 8 A009Z35 [Map Viewer]
UniSTS entry: Chr 8 G33026
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AF492463.1 Homo sapiens hemopoeitic lineage switch gene 5 (HLS5) mRNA, complete cds P
AB029021.1 Homo sapiens mRNA for KIAA1098 protein, partial cds P
BC069226.1 Homo sapiens tripartite motif-containing 35, mRNA (cDNA clone MGC:78391 IMAGE:6428667), complete cds PA
BC018337.1 Homo sapiens tripartite motif-containing 35, mRNA (cDNA clone IMAGE:4215244), complete cds PA
AK308236.1 Homo sapiens cDNA, FLJ98184 P
NM_171982.3 Homo sapiens tripartite motif containing 35 (TRIM35), mRNA P

EST sequences (10 of 88) [Show all sequences]

AI075822.1 Clone IMAGE:1675471 mixed 3' read A
AI076366.1 Clone IMAGE:1674341 mixed 3' read A
CB162848.1 Clone L18POOL1n1-41-B05 liver 5' read
AI276097.1 Clone IMAGE:1878114 mixed 3' read A
CB177622.1 Clone IMAGE:6553308 pancreas 5' read
CB178062.1 Clone IMAGE:6553308 pancreas 3' read
AI272949.1 Clone IMAGE:1876388 mixed 3' read A
AI769248.1 Clone IMAGE:2367115 mixed 3' read
AI869620.1 Clone IMAGE:2433034 brain 3' read
AW014058.1 Clone IMAGE:2708668 uncharacterized tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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