> ATP synthase mitochondrial F1 complex assembly factor 1 (ATPAF1)
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UGID:142876     UniGene Hs.100874     Homo sapiens (human)   ATPAF1 Order cDNA clone, Links
ATP synthase mitochondrial F1 complex assembly factor 1 (ATPAF1)

Human protein-coding gene ATPAF1. Represented by 460 ESTs from 222 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 142876 - Hs.100874]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_073582.3 ATPAF1 gene product H. sapiens 100.0 350
XP_003308131.1 PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 1-like P. troglodytes 100.0 239
NP_851383.2 Atpaf1 gene product M. musculus 93.1 347
NP_001017907.1 ATP synthase mitochondrial F1 complex assembly factor 1 D. rerio 67.8 286
Other hits (2 of 21) [Show all]SpeciesId(%)Len(aa)
XP_001108586.2 PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 1-like isoform 2 M. mulatta 99.1 349
XP_003891877.1 PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 1 isoform 1 P. anubis 99.1 349

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; uncharacterized tissue; intestine; lung; mammary gland; placenta; thymus; embryonic tissue; prostate; ovary; eye; mixed; lymph node; adrenal gland; cervix; kidney; skin; muscle; pancreas; spleen; heart; uterus; liver; mouth; bone marrow; connective tissue; stomach; bone; pituitary gland; thyroid; vascular; blood; tonsil; lymph; nerve; pineal gland; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p33-p32.3
UniSTS entry: Chr 1 D1S3533 [Map Viewer]
UniSTS entry: Chr 1 G34811
UniSTS entry: Chr 1 G20246
UniSTS entry: Chr 1 A005B23
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

NM_022745.4 Homo sapiens ATP synthase mitochondrial F1 complex assembly factor 1 (ATPAF1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA PA
BC071731.1 Homo sapiens ATP synthase mitochondrial F1 complex assembly factor 1, mRNA (cDNA clone MGC:88060 IMAGE:5213790), complete cds PA
AK026004.1 Homo sapiens cDNA: FLJ22351 fis, clone HRC06325 PA
NM_001042546.2 Homo sapiens ATP synthase mitochondrial F1 complex assembly factor 1 (ATPAF1), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA PA
BC008498.1 Homo sapiens ATP synthase mitochondrial F1 complex assembly factor 1, mRNA (cDNA clone MGC:14830 IMAGE:4281102), complete cds PA
BC018781.1 Homo sapiens ATP synthase mitochondrial F1 complex assembly factor 1, mRNA (cDNA clone MGC:32078 IMAGE:4870683), complete cds PA
AK311271.1 Homo sapiens cDNA, FLJ18313
AK310338.1 Homo sapiens cDNA, FLJ17380 P
AF111705.1 Homo sapiens SLTP002 (LST002) mRNA, complete cds A
AK302090.1 Homo sapiens cDNA FLJ52027 complete cds, highly similar to Homo sapiens ATP synthase mitochondrial F1 complex assembly factor 1 (ATPAF1), mRNA P
AK301874.1 Homo sapiens cDNA FLJ50725 complete cds, highly similar to Homo sapiens ATP synthase mitochondrial F1 complex assembly factor 1 (ATPAF1), mRNA P
AK296360.1 Homo sapiens cDNA FLJ55378 complete cds, moderately similar to Homo sapiens ATP synthase mitochondrial F1 complex assembly factor 1 (ATPAF1), mRNA
NM_001243728.1 Homo sapiens ATP synthase mitochondrial F1 complex assembly factor 1 (ATPAF1), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA PA
NM_001256418.1 Homo sapiens ATP synthase mitochondrial F1 complex assembly factor 1 (ATPAF1), nuclear gene encoding mitochondrial protein, transcript variant 4, mRNA PA

EST sequences (10 of 460) [Show all sequences]

AA993910.1 Clone IMAGE:1628088 mixed 3' read A
AA995566.1 Clone IMAGE:1604153 lung 3' read A
AI040912.1 Clone IMAGE:1647958 parathyroid 3' read A
AI097406.1 Clone IMAGE:1702952 brain 3' read A
R22613.1 Clone IMAGE:130220 placenta 5' read
R22614.1 Clone IMAGE:130220 placenta 3' read A
AI128814.1 Clone IMAGE:1694416 heart 3' read A
AI130845.1 Clone IMAGE:1709558 heart 3' read A
CB043959.1 Clone IMAGE:3217678 intestine 3' read A
CB043960.1 Clone IMAGE:3217678 intestine 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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