> Carbonic anhydrase VI (CA6)
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UGID:142833     UniGene Hs.100322     Homo sapiens (human)   CA6 Order cDNA clone, Links
Carbonic anhydrase VI (CA6)

Human protein-coding gene CA6. Represented by 51 ESTs from 13 cDNA libraries. EST representation biased toward salivary gland. Corresponds to 4 reference sequences (different isoforms). [UniGene 142833 - Hs.100322]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001257429.1 CA6 gene product H. sapiens 100.0 312
XP_002666525.1 PREDICTED: carbonic anhydrase 6-like D. rerio 59.0 293
NP_001085550.1 carbonic anhydrase 6 precursor X. laevis 59.0 273
NP_033932.2 Car6 gene product M. musculus 56.1 296
Other hits (2 of 17) [Show all]SpeciesId(%)Len(aa)
XP_003307839.2 PREDICTED: LOW QUALITY PROTEIN: carbonic anhydrase 6 P. troglodytes 98.4 316
XP_001099188.2 PREDICTED: carbonic anhydrase 6-like M. mulatta 92.6 311

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: salivary gland [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
Note: Highly represented (6.2 pct) in cDNA library dbEST:18497, SALGL1.
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: salivary gland; mixed; mammary gland; uncharacterized tissue; intestine; pharynx; eye; skin
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p36.2
UniSTS entry: Chr 1 GDB:636125
UniSTS entry: Chr 1 SHGC-74181 [Map Viewer]
UniSTS entry: Chr 1 D15S1390
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AK130528.1 Homo sapiens cDNA FLJ27018 fis, clone SLV05773
NM_001215.3 Homo sapiens carbonic anhydrase VI (CA6), transcript variant 1, mRNA PA
M57892.1 Human carbonic anhydrase isozyme VI (CA6) mRNA, complete cds P
AB103091.1 Homo sapiens CA6 mRNA for carbonic anhydrase VI nirs variant 3, complete cds P
AB103090.1 Homo sapiens CA6 mRNA for carbonic anhydrase VI nirs variant 2, complete cds
AB102863.1 Homo sapiens CA6 mRNA for carbonic anhydrase VI nirs variant 1, complete cds P
BC034350.1 Homo sapiens carbonic anhydrase VI, mRNA (cDNA clone MGC:21256 IMAGE:4746599), complete cds PA
AK300652.1 Homo sapiens cDNA FLJ60163 complete cds, highly similar to Carbonic anhydrase 6 precursor (EC 4.2.1.1) P
NM_001270502.1 Homo sapiens carbonic anhydrase VI (CA6), transcript variant 4, mRNA PA
NM_001270500.1 Homo sapiens carbonic anhydrase VI (CA6), transcript variant 2, mRNA P
NM_001270501.1 Homo sapiens carbonic anhydrase VI (CA6), transcript variant 3, mRNA PA

EST sequences (10 of 51) [Show all sequences]

BX282262.1 Clone IMAGp998G152035_;_IMAGE:823718 mixed A
CB985290.1 Clone IMAGE:30329882 mixed 5' read P
CB985486.1 Clone IMAGE:30328881 mixed 5' read
CB986048.1 Clone IMAGE:30328814 mixed 5' read P
CB986787.1 Clone IMAGE:30329291 mixed 5' read P
CB987092.1 Clone IMAGE:30325635 mixed 5' read P
CB955924.1 Clone IMAGE:30350494 mixed 5' read P
CB956681.1 Clone IMAGE:30350370 mixed 5' read P
CB956732.1 Clone IMAGE:30353599 mixed 5' read P
CB957335.1 Clone IMAGE:30353880 mixed 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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