Ornithine decarboxylase 1 (ODC1)

NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:120737 UniGene Gga.4340 Gallus gallus (chicken) ODC1

Links

Ornithine decarboxylase 1 (ODC1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
XP_419949.2	PREDICTED: similar to ornithine decarboxylase	G. gallus	100.0	463
NP_002530.1	ornithine decarboxylase 1	H. sapiens	89.4	460
NP_001080167.1	ornithine decarboxylase 1	X. laevis	87.2	459
NP_038642.2	ornithine decarboxylase, structural 1	M. musculus	86.8	460
NP_571876.1	ornithine decarboxylase 1	D. rerio	82.0	456
XP_326764.1	hypothetical protein	N. crassa	53.2	419
NP_504752.1	Ornithine DeCarboxylase family member (odc-1)	C. elegans	50.6	391
NP_477052.2	Ornithine decarboxylase 1 CG8721-PA	D. melanogaster	50.1	359
NP_012737.1	Ornithine decarboxylase, catalyzes the first step in polyamine biosynthesis; degraded in a proteasome-dependent manner in the presence of excess polyamines; Spe1p	S. cerevisiae	50.1	379
XP_001698872.1	ornithine decarboxylase 2	C. reinhardtii	45.9	460

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	limb; spleen; liver; small intestine; head; mixed; bursa of Fabricius; embryonic tissue; uncharacterized tissue; muscle; epiphyseal growth plate; gonad; testis; other; blood; pancreas; ovary

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (1)

X64710.1

G.gallus ODC mRNA for ornithine decarboxylase

Model sequences (1)

XM_419949.2

PREDICTED: Gallus gallus ornithine decarboxylase 1 (ODC1), mRNA

EST sequences (10 of 65) [Show all sequences]

CD733628.1	Clone 1GAL_50A08	other	5' read	P
CD738724.1	Clone 1GAL_59I03	other	5' read	P
CD763813.1	Clone GGEZLB1006B03	embryonic tissue		P
CK606878.1	Clone Control_M21	blood	5' read
CK608620.1	Clone IFNc_K12	blood	5' read	P
CN226897.1		testis	5' read	PA
CN778712.1	Clone pgn2c.pk013.c6.f_3'end_of_pat.pk0074.f10	mixed	5' read	P
DR424081.1	Clone naw03a02	head	5' read	P
DT658197.1	Clone UAGgRT75_G05_G5_13	mixed	5' read	P
AM071606.1	Clone C0000222E19_T7	mixed		P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria