Chromosome 3 open reading frame 39 (C3orf39)

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UGID:1182199 UniGene Gga.12348 Gallus gallus (chicken) C3orf39

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Chromosome 3 open reading frame 39 (C3orf39)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001012294.1	chromosome 3 open reading frame 39	G. gallus	100.0	576
NP_001086091.1	glycosyltransferase	X. laevis	82.3	577
NP_116195.2	glycosyltransferase	H. sapiens	80.0	579
NP_705768.3	glycosyltransferase	M. musculus	79.3	579
NP_001012384.1	glycosyltransferase	D. rerio	78.0	577

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; head; small intestine; uncharacterized tissue; embryonic tissue; heart; limb; mixed

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

UniSTS entry:

MCW0274

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

BX935525.1	Gallus gallus finished cDNA, clone ChEST536j17	P
BX932757.1	Gallus gallus finished cDNA, clone ChEST473f10	P
AJ868536.1	Gallus gallus mRNA for glycosyltransferase (AGO61 gene)	P
NM_001012294.1	Gallus gallus chromosome 3 open reading frame 39 (C3orf39), mRNA	P

EST sequences (10)

AF030587.1	Clone MCW274	embryonic tissue
BU233752.1	Clone ChEST331k24	head	5' read	P
BU280125.1	Clone ChEST581f21	brain	5' read
BU301382.1	Clone ChEST605k3	small intestine	5' read	P
BU380294.1	Clone ChEST535k13	uncharacterized tissue	5' read	P
BU381260.1	Clone ChEST536j17	uncharacterized tissue	5' read	P
BU109134.1	Clone ChEST60c3	heart	5' read	P
BU128666.1	Clone ChEST63j10	limb	5' read	P
BM490242.1	Clone pgp2n.pk002.n16	mixed	5' read	P
BU351365.1	Clone ChEST473f10	brain	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria