Protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase (pomgnt1)

Restricted Expression:

hatching [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

heart; whole body; kidney; muscle; reproductive system; inner ear; mixed; fin

NCBI

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Finding cDNAs

UGID:2446973 UniGene Dr.85699 Danio rerio (zebrafish) pomgnt1

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Protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase (pomgnt1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001036152.2	O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1	D. rerio	100.0	652
NP_001088428.1	hypothetical protein LOC495292	X. laevis	85.5	646
NP_080927.1	protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase isoform 1	M. musculus	83.0	654
NP_060209.3	O-linked mannose beta1,2-N-acetylglucosaminyltransferase	H. sapiens	82.7	654

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

BC097123.1	Danio rerio zgc:158130, mRNA (cDNA clone IMAGE:7437129), partial cds	PA
DQ826747.1	Danio rerio POMGnT1 mRNA, complete cds	P
NM_001042687.3	Danio rerio protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase (pomgnt1), mRNA	PA
BC129135.1	Danio rerio zgc:158130, mRNA (cDNA clone MGC:158130 IMAGE:7068396), complete cds	PA

EST sequences (10 of 36) [Show all sequences]

BG883486.1	Clone IMAGE:4744268	kidney	5' read	P
BG883707.1	Clone IMAGE:4744268	kidney	3' read	A
AL716060.1	Clone BN0AA011ZB09	inner ear	5' read
CD585808.1	Clone RK033A1B02	kidney	5' read	P
CD604032.1	Clone RZ151A2F01	kidney	5' read	P
CK237501.1	Clone IMAGE:7068396	kidney	5' read	P
CK688409.1	Clone IMAGE:7151461	whole body	5' read	P
CV106148.1	Clone IMAGE:7437129	whole body	5' read	P
CV482325.1	Clone IMAGE:7437129	whole body	3' read	P
CT688052.1	Clone ZF_mu_229f12	muscle	3' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria