NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:2443754     UniGene Dr.82480     Danio rerio (zebrafish)   zgc:66135
Zgc:66135 (zgc:66135)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_956791.1 hypothetical protein LOC393469 D. rerio 100.0 421
NP_001086043.1 GDP-mannose pyrophosphorylase A a X. laevis 82.7 420
NP_037467.2 GDP-mannose pyrophosphorylase A H. sapiens 77.4 419
NP_598469.1 GDP-mannose pyrophosphorylase A M. musculus 77.1 419
NP_611051.2 CG8207 D. melanogaster 60.7 437
NP_491349.1 hypothetical protein Y47D9A.1 C. elegans 52.5 397
XP_325792.1 hypothetical protein N. crassa 48.0 430
NP_177629.1 ADP-glucose pyrophosphorylase family protein A. thaliana 46.4 404

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: larval [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: whole body; reproductive system; muscle; eye
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

BC055506.1 Danio rerio zgc:66135, mRNA (cDNA clone MGC:66135 IMAGE:3815342), complete cds PA
NM_200497.1 Danio rerio zgc:66135 (zgc:66135), mRNA PA

EST sequences (10 of 26) [Show all sequences]

BF158377.1 Clone IMAGE:3815342 whole body 5' read P
BF158458.1 Clone IMAGE:3815343 whole body 5' read P
BG304212.1 Clone IMAGE:3815343 whole body 3' read
BM530526.1 Clone IMAGE:5627307 whole body 5' read
BI984298.1 Clone IMAGE:5304987 reproductive system 3' read A
BI984819.1 Clone IMAGE:5304987 reproductive system 5' read P
BQ450679.1 Clone IMAGE:5903080 whole body 5' read
BQ480268.1 Clone IMAGE:5901962 whole body 5' read
BQ617823.1 Clone IMAGE:5901536 whole body 5' read
CK686602.1 Clone IMAGE:7149336 whole body 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help