Histone deacetylase 3 (hdac3)

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UGID:2441881 UniGene Dr.80607 Danio rerio (zebrafish) hdac3

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Histone deacetylase 3 (hdac3)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_957284.1	histone deacetylase 3	D. rerio	100.0	427
NP_034541.2	histone deacetylase 3	M. musculus	94.9	427
NP_003874.2	histone deacetylase 3	H. sapiens	94.9	427
NP_651978.2	Hdac3	D. melanogaster	78.3	433
NP_001079396.1	similar to histone deacetylase 1	X. laevis	68.6	423
NP_014069.1	Histone deacetylase; regulates transcription and silencing; Rpd3p	S. cerevisiae	67.2	413
XP_325004.1	hypothetical protein	N. crassa	67.1	422
NP_190054.2	HDA9 (HISTONE DEACETYLASE 9); histone deacetylase	A. thaliana	66.9	420
XP_001695812.1	histone deacetylase	C. reinhardtii	66.8	400
NP_506599.1	Histone DeAcetylase family member (hda-1)	C. elegans	65.2	431

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	whole body; muscle; reproductive system; fin; brain; inner ear

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	14
UniSTS entry:		fi30d11.x1
UniSTS entry:		fk98f03.x1

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	BC044543.1	Danio rerio histone deacetylase 3, mRNA (cDNA clone MGC:55927 IMAGE:3819179), complete cds	PA
	NM_200990.1	Danio rerio histone deacetylase 3 (hdac3), mRNA	PA

EST sequences (10 of 66) [Show all sequences]

AW154633.1	Clone IMAGE:2639157	whole body	3' read
AW174938.1	Clone IMAGE:2639157	whole body	5' read	P
AW343964.1	Clone IMAGE:2643113	whole body	3' read
BE201780.1		fin	3' read	P
BE557317.1		fin	5' read
BI875616.1	Clone IMAGE:3819179	whole body	5' read	P
BI877511.1	Clone IMAGE:3819179	whole body	3' read
BM531946.1	Clone IMAGE:5630870	whole body	5' read	P
BI709338.1	Clone IMAGE:5072275	fin	5' read	P
BM776750.1	Clone IMAGE:5602573	whole body	3' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria