Alkaline ceramidase 1 (acer1)

Restricted Expression:

gastrula [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.

GEO profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

whole body; reproductive system; olfactory rosettes; uncharacterized tissue; mixed; gills; bone

NCBI

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Finding cDNAs

UGID:2441780 UniGene Dr.80506 Danio rerio (zebrafish) acer1

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Alkaline ceramidase 1 (acer1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001017603.1	alkaline ceramidase 1	D. rerio	100.0	265
NP_783858.1	alkaline ceramidase 1	M. musculus	54.4	259
NP_597999.1	alkaline ceramidase 1	H. sapiens	52.1	259
NP_001090322.1	putative protein, with at least 4 transmembrane domains, of eukaryotic origin (5H174)	X. laevis	46.9	254

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

BC092849.1	Danio rerio alkaline ceramidase 1, mRNA (cDNA clone MGC:110285 IMAGE:7400329), complete cds	PA
NM_001017603.1	Danio rerio alkaline ceramidase 1 (acer1), mRNA	PA
BC164606.1	Danio rerio alkaline ceramidase 1, mRNA (cDNA clone MGC:191781 IMAGE:100060090), complete cds	P

EST sequences (10 of 23) [Show all sequences]

AW128435.1	Clone IMAGE:3738975	mixed	5' read	P
BI886238.1	Clone MPMGp637_12A11;MPMGp637A1112	whole body	5' read	P
BI887188.1	Clone MPMGP637_2A4;MPMGP637A042	whole body	5' read	P
BI889590.1	Clone MPMGp637_23G19;MPMGp637G1923	whole body	5' read
BI890203.1	Clone MPMGP637_4M15;MPMGP637M154	whole body	5' read	P
BI892068.1	Clone MPMGp637_19G22;MPMGp637G2219	whole body	5' read
BI892129.1	Clone MPMGp637_20H2;MPMGp637H0220	whole body	5' read	P
BI892438.1	Clone MPMGp637_20I24;MPMGp637I2420	whole body	5' read	P
CD052625.1	Clone MPMGp637J0126	whole body	5' read	P
CD052819.1	Clone MPMGp637G2219	whole body	5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria