ER degradation enhancer, mannosidase alpha-like 2 (edem2)

NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:2441149 UniGene Dr.79875 Danio rerio (zebrafish) edem2

Links

ER degradation enhancer, mannosidase alpha-like 2 (edem2)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
XP_696207.3	PREDICTED: ER degradation enhancer, mannosidase alpha-like 2	D. rerio	100.0	488
NP_663512.1	putative alpha-mannosidase	M. musculus	81.2	562
NP_060687.2	ER degradation enhancer, mannosidase alpha-like 2 isoform 1	H. sapiens	81.0	567
NP_569959.1	Edem1, isoform B	D. melanogaster	66.1	487
NP_506018.1	hypothetical protein F10C2.5	C. elegans	59.9	496
NP_199184.1	glycoside hydrolase family 47 protein	A. thaliana	48.3	476
NP_001091440.1	hypothetical protein LOC100049149	X. laevis	45.1	459

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	whole body; eye; reproductive system; mixed; olfactory rosettes; muscle; uncharacterized tissue; kidney

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	23
	UniSTS entry:		fd28f04.y1

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	BC045854.1	Danio rerio ER degradation enhancer, mannosidase alpha-like 2, mRNA (cDNA clone IMAGE:3819747), partial cds	PA
	BC055547.1	Danio rerio ER degradation enhancer, mannosidase alpha-like 2, mRNA (cDNA clone IMAGE:5915973), partial cds	PA

Model sequences (1)

XM_691115.3

PREDICTED: Danio rerio ER degradation enhancer, mannosidase alpha-like 2 (edem2), mRNA

EST sequences (10 of 37) [Show all sequences]

AI979359.1	Clone IMAGE:3731071	mixed	5' read	P
BF156914.1	Clone IMAGE:3818192	whole body	5' read	P
BG303618.1	Clone IMAGE:3818192	whole body	3' read	P
BI876861.1	Clone IMAGE:3819747	whole body	5' read	P
BI878406.1	Clone IMAGE:3819747	whole body	3' read	PA
BM182725.1	Clone IMAGE:5412828	whole body	5' read	P
BM183675.1	Clone IMAGE:5413257	whole body	5' read	P
BM183977.1	Clone IMAGE:5413257	whole body	3' read	P
BM265386.1	Clone IMAGE:5611974	whole body	3' read	PA
BM265693.1	Clone IMAGE:5611974	whole body	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria