Zgc:56326 (zgc:56326)

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Finding cDNAs

UGID:2438708 UniGene Dr.77434 Danio rerio (zebrafish) zgc:56326

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Zgc:56326 (zgc:56326)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_957461.1	4-hydroxyphenylpyruvate dioxygenase	D. rerio	100.0	386
NP_001088204.1	hypothetical protein LOC495029	X. laevis	81.8	385
NP_002141.1	4-hydroxyphenylpyruvate dioxygenase	H. sapiens	78.3	382
NP_032303.1	4-hydroxyphenylpyruvate dioxygenase	M. musculus	76.0	384
NP_730536.1	CG11796, isoform A	D. melanogaster	70.0	379
NP_499324.1	4-HydroxyPhenylpyruvate Dioxygenase (HPD) family member (hpd-1)	C. elegans	68.6	382
XP_328269.1	hypothetical protein	N. crassa	58.2	391

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	cDNA Sources:	whole body; mixed; liver; reproductive system; kidney; intestine; uncharacterized tissue

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	5
UniSTS entry:		fb58f02
UniSTS entry:		fd50e09.x1

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

BC046075.1	Danio rerio zgc:56326, mRNA (cDNA clone MGC:56326 IMAGE:5603649), complete cds	PA
AY398361.1	Danio rerio clone RK355A3C10 4-hydroxyphenylpyruvate dioxygenase (HPD) mRNA, complete cds	P
NM_201167.1	Danio rerio zgc:56326 (zgc:56326), mRNA	PA

EST sequences (10 of 159) [Show all sequences]

AI545594.1	Clone IMAGE:3716921	mixed	3' read	A
AI558841.1	Clone IMAGE:3716909	mixed	5' read	P
BF156357.1	Clone IMAGE:3817241	whole body	5' read	P
BF717682.1	Clone IMAGE:3733192	mixed	5' read	P
BI984434.1	Clone IMAGE:5304314	reproductive system	5' read	P
BM102989.1	Clone IMAGE:5411034	whole body	5' read	P
BM859293.1	Clone IMAGE:5603649	whole body	5' read	P
AL923897.1	Clone 132-A12-2	whole body		P
CA472673.1	Clone IMAGE:6793436	kidney	5' read	P
CB366592.1	Clone IMAGE:6911022	whole body	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria