Galactosylceramidase b (galcb)

Restricted Expression:

adult [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

whole body; reproductive system; kidney; olfactory rosettes; muscle; mixed; eye

NCBI

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Finding cDNAs

UGID:110885 UniGene Dr.16713 Danio rerio (zebrafish) galcb

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Galactosylceramidase b (galcb)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_998276.1	galactosylceramidase	D. rerio	100.0	663
NP_000144.2	galactosylceramidase isoform a precursor	H. sapiens	71.9	644
NP_032105.2	galactosylceramidase	M. musculus	71.4	643
NP_498726.2	hypothetical protein C29E4.10	C. elegans	45.1	224

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	17
UniSTS entry:		fi04e07.x1
UniSTS entry:		fi23h08.x1

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	BC049316.1	Danio rerio galactosylceramidase b, mRNA (cDNA clone MGC:56444 IMAGE:5612358), complete cds	PA
	NM_213111.1	Danio rerio galactosylceramidase b (galcb), mRNA	PA

EST sequences (10 of 47) [Show all sequences]

AA566900.1		whole body	5' read	P
AW115875.1	Clone IMAGE:2600196	whole body	3' read
AW127898.1	Clone IMAGE:2600196	whole body	5' read	P
AW153631.1	Clone IMAGE:2602047	whole body	5' read	P
AW154211.1	Clone IMAGE:2602047	whole body	3' read	P
BF157747.1	Clone IMAGE:3816494	whole body	5' read	P
BM184921.1	Clone IMAGE:5159777	reproductive system	5' read	P
BM403474.1	Clone zam4496	muscle	5' read	P
BI980714.1	Clone IMAGE:5159777	reproductive system	3' read	PA
BM264810.1	Clone IMAGE:5612358	whole body	3' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria