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UGID:108084     UniGene Dr.13371     Danio rerio (zebrafish)   hif1an Order cDNA clone, Links
Hypoxia-inducible factor 1, alpha subunit inhibitor (hif1an)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_958904.1 hypoxia-inducible factor 1, alpha subunit inhibitor D. rerio 100.0 343
NP_060372.2 hypoxia-inducible factor 1, alpha subunit inhibitor H. sapiens 88.9 324
NP_795932.2 hypoxia-inducible factor 1, alpha subunit inhibitor M. musculus 88.8 346
NP_001085028.1 hypothetical protein LOC432095 X. laevis 84.6 349

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: gastrula [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: whole body; reproductive system; eye; brain; muscle; kidney; mixed; uncharacterized tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 13
UniSTS entry: fc44e11.y1
UniSTS entry: fc42c06.y1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

BC044475.1 Danio rerio hypoxia-inducible factor 1, alpha subunit inhibitor, mRNA (cDNA clone MGC:55763 IMAGE:3816694), complete cds PA
NM_201496.1 Danio rerio hypoxia-inducible factor 1, alpha subunit inhibitor (hif1an), mRNA PA
BC164149.1 Danio rerio hypoxia-inducible factor 1, alpha subunit inhibitor, mRNA (cDNA clone MGC:191324 IMAGE:100059633), complete cds P

EST sequences (10 of 82) [Show all sequences]

AI794260.1 Clone IMAGE:3724042 mixed 5' read P
AI794453.1 Clone IMAGE:3724268 mixed 5' read P
BF157782.1 Clone IMAGE:3816694 whole body 5' read P
BG985812.1 Clone 5139 whole body P
BI890693.1 Clone MPMGp637_24L2;MPMGp637L0224 whole body 5' read PA
BM083099.1 Clone IMAGE:5306563 reproductive system 5' read P
BM182655.1 Clone IMAGE:5412899 whole body 5' read P
BM104252.1 Clone IMAGE:5411949 whole body 3' read
BM104573.1 Clone IMAGE:5411949 whole body 5' read P
AL924356.1 Clone 138-F03-1 whole body


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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