TAL1 (SCL) interrupting locus (stil)

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UGID:106860 UniGene Dr.11575 Danio rerio (zebrafish) stil

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TAL1 (SCL) interrupting locus (stil)

Zebrafish protein-coding gene stil. Represented by 18 ESTs from 13 cDNA libraries. Corresponds to reference sequence NM_173244.1. [UniGene 106860 - Dr.11575]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_775351.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	SCL-interrupting locus protein homolog	D. rerio	100.0	1261
Other hits (2 of 5) [Show all]		Species	Id(%)	Len(aa)
XP_001521335.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: SCL-interrupting locus protein-like, partial	O. anatinus	54.4	966
XP_002192248.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: similar to Scl/Tal1 interrupting locus	T. guttata	53.0	984

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	whole body; reproductive system; muscle; kidney; fin

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	22
	UniSTS entry:		fi15h10.x1

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

AY099525.1	Danio rerio TAL1/SCL interrupting locus-like protein (sill) mRNA, complete cds	P
NM_173244.1	Danio rerio TAL1 (SCL) interrupting locus (stil), mRNA	P
BC091991.1	Danio rerio TAL1 (SCL) interrupting locus, mRNA (cDNA clone MGC:110502 IMAGE:7147918), complete cds	PA
BC164583.1	Danio rerio TAL1 (SCL) interrupting locus, mRNA (cDNA clone MGC:191758 IMAGE:100060067), complete cds	P

EST sequences (10 of 18) [Show all sequences]

AW134078.1	Clone IMAGE:2601283	whole body	5' read	P
BF158540.1	Clone IMAGE:3815681	whole body	5' read	P
BM530920.1	Clone IMAGE:5618345	reproductive system	3' read	A
BM533345.1	Clone IMAGE:5633092	whole body	5' read
BQ077369.1	Clone IMAGE:5820078	whole body	5' read	A
BQ617560.1	Clone IMAGE:5898848	reproductive system	5' read	P
CD585352.1	Clone RK030A3H06	kidney	5' read	P
CK685341.1	Clone IMAGE:7147918	whole body	5' read	P
CO358692.1		reproductive system		P
CT658666.2	Clone ZF_mu_12i07	muscle	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria