> Trithorax-like (Trl)
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UGID:92427     UniGene Dm.7610     Drosophila melanogaster (fruit fly)   Trl Links
Trithorax-like (Trl)

Fruit fly protein-coding gene Trl. Represented by 154 ESTs from 21 cDNA libraries. Corresponds to 13 reference sequences (different isoforms). [UniGene 92427 - Dm.7610]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_996080.1 Trithorax-like, isoform A D. melanogaster 100.0 581
XP_002084878.1 GD12604 D. simulans 99.6 499
Other hits (2 of 5) [Show all]SpeciesId(%)Len(aa)
XP_001842905.1 conserved hypothetical protein C. quinquefasciatus 85.5 213
XP_624471.2 PREDICTED: hypothetical protein LOC552090 A. mellifera 82.3 119

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: whole body; uncharacterized tissue; mixed; head; ovary; testis; blood; gonad; embryonic tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3L
Map position: 70F4-70F4
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (32)

X59784.1 Drosophila melanogaster Nc70F gene P
L22205.1 Drosophila melanogaster GAGA transcription factor mRNA, complete cds PA
U68563.1 Drosophila melanogaster GAGA-519b Adf-2 isoform mRNA, complete cds PA
U18386.1 Drosophila melanogaster GAGA-519a Adf-2 isoform mRNA, complete cds PA
U16728.1 Drosophila melanogaster GAGA-581 Adf-2 isoform (TfGAGA/Adf-2) mRNA, complete cds PA
AY069651.1 Drosophila melanogaster LD41963 full insert cDNA PA
AJ459425.1 Drosophila melanogaster partial mRNA for GAGA transcription factor, 566 isoform (Trl gene) P
AJ459426.1 Drosophila melanogaster partial mRNA for GAGA transcription factor, 596 isoform (Trl gene) P
AJ441087.1 Drosophila melanogaster partial mRNA for GAGA factor (Trl gene) P
BT003649.1 Drosophila melanogaster AT11176 full insert cDNA PA
NM_206360.1 Drosophila melanogaster Trithorax-like (Trl), transcript variant F, mRNA P
NM_206359.4 Drosophila melanogaster Trithorax-like (Trl), transcript variant E, mRNA P
NM_206358.3 Drosophila melanogaster Trithorax-like (Trl), transcript variant A, mRNA PA
NM_206357.3 Drosophila melanogaster Trithorax-like (Trl), transcript variant D, mRNA PA
NM_206356.3 Drosophila melanogaster Trithorax-like (Trl), transcript variant B, mRNA PA
NM_206355.4 Drosophila melanogaster Trithorax-like (Trl), transcript variant C, mRNA P
NM_001038926.2 Drosophila melanogaster Trithorax-like (Trl), transcript variant I, mRNA PA
NM_001038925.3 Drosophila melanogaster Trithorax-like (Trl), transcript variant H, mRNA P
NM_001038924.3 Drosophila melanogaster Trithorax-like (Trl), transcript variant J, mRNA PA
NM_001043140.3 Drosophila melanogaster CG33260 (CG33260), mRNA
BT082098.1 Drosophila melanogaster MIP04022 full insert cDNA PA
NM_001169973.2 Drosophila melanogaster CG42507 (CG42507), transcript variant B, mRNA PA
NM_001169972.2 Drosophila melanogaster CG42507 (CG42507), transcript variant A, mRNA PA
BT120125.1 Drosophila melanogaster MIP03822 full insert cDNA A
NM_001274917.1 Drosophila melanogaster Trithorax-like (Trl), transcript variant K, mRNA A
JV218140.1 TSA: Drosophila melanogaster isotig00522.Dmte mRNA sequence
JV218138.1 TSA: Drosophila melanogaster isotig00520.Dmte mRNA sequence
JV218139.1 TSA: Drosophila melanogaster isotig00521.Dmte mRNA sequence
JV218137.1 TSA: Drosophila melanogaster isotig00519.Dmte mRNA sequence
JV216715.1 TSA: Drosophila melanogaster isotig08563.Dmov mRNA sequence
JV212081.1 TSA: Drosophila melanogaster isotig03889.Dmov mRNA sequence
BT132632.1 Drosophila melanogaster MIP03922 full insert cDNA A

EST sequences (10 of 154) [Show all sequences]

AI405143.1 Clone GH25068 head 5' read P
AI406178.1 Clone GH26394 head 5' read P
AI517771.1 Clone GH28829 head 5' read
AI533421.1 Clone SD05224 embryonic tissue 5' read
AW943589.1 Clone LD41963 whole body 3' read P
BE977477.1 Clone bs64e03 testis 5' read
BF494869.2 Clone AT03635 testis 5' read P
BF494881.2 Clone AT03649 testis 5' read P
BF497103.2 Clone AT11176 testis 5' read
BF501513.2 Clone AT16872 testis 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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