Cacophony (cac)

Restricted Expression:

adult [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.

GEO profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

mixed; uncharacterized tissue; head; whole body; embryonic tissue; blood

NCBI

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UGID:87840 UniGene Dm.2395 Drosophila melanogaster (fruit fly) cac

Links

Cacophony (cac)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_996417.1	cacophony, isoform E	D. melanogaster	100.0	1850
NP_741734.1	UNCoordinated family member (unc-2)	C. elegans	65.8	1467
NP_062528.2	calcium channel, voltage-dependent, alpha 1F subunit	M. musculus	50.9	1532
XP_001719419.1	PREDICTED: hypothetical protein, partial	H. sapiens	48.4	1384
XP_699282.3	PREDICTED: similar to Dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1	D. rerio	46.5	1484

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	X
Map position:	10F8-11A1\|1-36.7 cM
UniSTS entry:	Chr X	Dm0457

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

U55776.1	Drosophila melanogaster calcium channel alpha-1 subunit (Dmca1A) mRNA, complete cds	P
NM_078578.3	Drosophila melanogaster cacophony (cac), transcript variant A, mRNA	P
AY119459.1	Drosophila melanogaster GH02471 full insert cDNA	P
NM_206697.2	Drosophila melanogaster cacophony (cac), transcript variant B, mRNA	P
NM_206696.2	Drosophila melanogaster cacophony (cac), transcript variant C, mRNA	P
NM_206695.2	Drosophila melanogaster cacophony (cac), transcript variant D, mRNA	P
NM_206694.2	Drosophila melanogaster cacophony (cac), transcript variant E, mRNA	P
NM_206693.2	Drosophila melanogaster cacophony (cac), transcript variant F, mRNA	P
NM_001014735.2	Drosophila melanogaster cacophony (cac), transcript variant G, mRNA	P
NM_001014734.2	Drosophila melanogaster cacophony (cac), transcript variant H, mRNA	P
NM_001014733.2	Drosophila melanogaster cacophony (cac), transcript variant I, mRNA	P
NM_001014732.2	Drosophila melanogaster cacophony (cac), transcript variant J, mRNA	P
BT025082.1	Drosophila melanogaster IP14892 full insert cDNA	PA

EST sequences (10 of 66) [Show all sequences]

AW940097.1	Clone GH02471	head	3' read
AI063049.2	Clone GH02471	head	5' read	P
BG639580.1	Clone SD02821	embryonic tissue	3' read
AI531637.2	Clone SD02821	embryonic tissue	5' read
BI617467.1	Clone RH47814	head	5' read
AA567398.1	Clone HL01128	mixed	5' read	P
AA698656.1	Clone HL05404	mixed	5' read	P
AA567406.1	Clone HL01140	mixed	5' read	P
CO153796.1	Clone EN02837	blood	5' read	PA
CO267205.1	Clone EK149110	mixed	5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria