SQuashed Vulva (sqv-5)

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UGID:49809 UniGene Cel.7548 Caenorhabditis elegans (nematode) sqv-5

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SQuashed Vulva (sqv-5)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001021640.2	SQuashed Vulva family member (sqv-5)	C. elegans	100.0	733

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	mixed; unknown developmental stage; L1 larva; embryo

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

AB088398.1	Caenorhabditis elegans ChSy-S mRNA for chondroitin synthase-S, complete cds	P
AB088397.1	Caenorhabditis elegans ChSy mRNA for chondroitin synthase, complete cds	P
NM_001026469.4	Caenorhabditis elegans SQuashed Vulva family member (sqv-5) (sqv-5) mRNA, complete cds	P
NM_001026468.3	Caenorhabditis elegans SQuashed Vulva family member (sqv-5) (sqv-5) mRNA, complete cds	P

EST sequences (10 of 25) [Show all sequences]

CB387942.1		mixed		P
CB407324.1		mixed		P
BJ755994.1	Clone yk1420g09	mixed	5' read	P
BJ780209.1	Clone yk1420g09	mixed	3' read
EC013170.1	Clone 1784805	unknown developmental stage		P
EC015152.1	Clone 1414519	unknown developmental stage		P
EC023731.1	Clone 1784805	unknown developmental stage
EC025642.1	Clone 1414519	unknown developmental stage
EC028580.1	Clone 1820874	unknown developmental stage		P
EC031929.1	Clone 1823857	unknown developmental stage		P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria