GABA TransAminase family (gta-1)

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UGID:48141 UniGene Cel.5440 Caenorhabditis elegans (nematode) gta-1

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GABA TransAminase family (gta-1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_501862.1	GABA TransAminase family member (gta-1)	C. elegans	100.0	482
NP_649168.2	CG7433, isoform A	D. melanogaster	56.5	461
XP_959026.2	4-aminobutyrate aminotransferase	N. crassa	54.3	457
NP_958906.1	4-aminobutyrate aminotransferase	D. rerio	54.0	404
NP_001083628.1	hypothetical protein LOC399028	X. laevis	52.5	479
NP_001120920.1	4-aminobutyrate aminotransferase precursor	H. sapiens	52.4	454
NP_766549.2	4-aminobutyrate aminotransferase	M. musculus	52.4	457
NP_011533.1	Gamma-aminobutyrate (GABA) transaminase (4-aminobutyrate aminotransferase) involved in the 4-aminobutyrate and glutamate degradation pathways; required for normal oxidative stress tolerance and nitrogen utilization; Uga1p	S. cerevisiae	49.2	460

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	cDNA Sources:	mixed; embryo; L1 larva; unknown developmental stage; L2 larva; L4 larva

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (1)

NM_069461.2

Caenorhabditis elegans GABA TransAminase family member (gta-1) (gta-1) mRNA, complete cds

EST sequences (10 of 87) [Show all sequences]

CB403815.1		mixed		P
BJ754110.1	Clone yk1398e01	mixed	5' read	P
BJ756723.1	Clone yk1493d02	mixed	5' read	P
BJ757808.1	Clone yk1506g06	mixed	5' read	P
BJ757891.1	Clone yk1507g03	mixed	5' read	P
BJ762079.1	Clone yk1583d08	mixed	5' read	P
BJ762699.1	Clone yk1590f06	mixed	5' read	P
BJ764085.1	Clone yk1607c10	mixed	5' read	P
BJ767238.1	Clone yk1656d01	mixed	5' read	P
BJ769903.1	Clone yk1699h08	mixed	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria