Ornithine DeCarboxylase (odc-1)

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Finding cDNAs

UGID:58937 UniGene Cel.17530 Caenorhabditis elegans (nematode) odc-1

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Ornithine DeCarboxylase (odc-1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_504752.1	Ornithine DeCarboxylase family member (odc-1)	C. elegans	100.0	421
NP_001080167.1	ornithine decarboxylase 1	X. laevis	50.5	400
NP_002530.1	ornithine decarboxylase 1	H. sapiens	50.3	390
NP_038642.2	ornithine decarboxylase 1	M. musculus	49.9	393
NP_477052.2	ornithine decarboxylase 1	D. melanogaster	45.8	373

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	cDNA Sources:	mixed; L1 larva; L4 larva; embryo; unknown developmental stage; L2 larva

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (1)

NM_072351.5

Caenorhabditis elegans Ornithine DeCarboxylase family member (odc-1) (odc-1) mRNA, complete cds

EST sequences (10 of 44) [Show all sequences]

CB391518.1		mixed		P
CB395290.1		mixed		P
CB395298.1		mixed		P
BJ771720.1	Clone yk1721b08	mixed	5' read	P
BJ773662.1	Clone yk1744d02	mixed	5' read	P
BJ781630.1	Clone yk1501e04	mixed	3' read	P
BJ786003.1	Clone yk1577c01	mixed	3' read	P
BJ803088.1	Clone yk1468h01	L4 larva	5' read	P
BJ803927.1	Clone yk1479b10	L4 larva	5' read	P
BJ808468.1	Clone yk1686a05	L4 larva	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria